Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_1996 |
Symbol | |
ID | 7285712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | + |
Start bp | 2404074 |
End bp | 2409083 |
Gene Length | 5010 bp |
Protein Length | 1669 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643582818 |
Product | outer membrane autotransporter barrel domain protein |
Protein accession | YP_002480570 |
Protein GI | 220905258 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.357801 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTTGT CCAAAAACGC GGTTGGTAAC CTGATTAACA GGTATAAGGC GGTATTGGGG AAATGCCGCC TGATCAACAC CTTCGGCTCG CTGGCACTGG CAGCGGCCCT GACCCTGGGC AGCACCGGGC TGGCTATGGC GGCAGACTGG GATGGAGGCA ACCTGACCGT AGGCTCCGGC GGGGACCAGA CAAGCCTTGC AGTGAATTCT GACGCGGTAG CACTTACAGG AACCCTGACC ATCACTGACG GCGGCACGGT CACCGTGAAC ATCCCCGGGA GCATTTCGGC CGGAGATGGC GCTACCCCTT CCAACGGCAA ACTGCTGGTA ACGGGCGGCA CTTTGAACGT CAACGGCTAT TCGGATTCCC GCGACCTGCA GATCACGGGC GGAACCGTCA ACATCAACGG CACAAACGGT AACGGCTGGC GCGAAAACGG CCTTGGCGGC TATGCTGAAA CGACCGATGA AAACGATGCC GCCATTTCTA CCGGCCTGCC CACCCTTGTT TCCGGCCCCA ATACGGTGGT CAACATCACC TCGGCCAATC TTTTTGGAGG CGCGGCAGCT GACTTTGCGA CAGCTCAACT GAAAATTGCC GACGGCGCGA CCGTCAACCT TATGGGCCTG TCCCCGGACG AAAACCATAC AAAAGATTTT GATGATGCAG GAATGCTTTT TACCGGCAAG GGTGCGGCCT CTCTTGACAA AGACAGCGCC AACCTGCTGA TCACCGGCGA CAGCACCAGA ATCAACGTTG CTCAGGGCAA TCACGGTGTA TTCAATGCCG GCGTTACCCA CATCACAGAC GGCGCAACCG TTGATGTGCA AGGCGGTCTT CTGCTGACAG GCTTTCTTAA CACGCCCCCA TCTGAACCGG GCAAAACTGT CACCGGCGCC ATGCCTGGCG CTCTGGATGG ATACACCAGG GTTACTGATG GAGGAAGCAT TCTTGTTGGA AACAAGGGGC ATCTTTTCCT GAACAAGGGC ATGACCCTGG ATGTGGCTGC CGATGGCGTG CTGGACAACG GCGGCAAGGT CAACCTTTAT GCTGACTCTA CGCTTGCCTA CAGCGCTGGC GGCGACCACA AGCTGACGGG CATTGTAGCC AACGCAGGCA CGCTTTCGGT GACTGACGCC CATCTTGACC TGACCGGAGC CGAGCTTGAA AAATTCAGCG GCACTGCCGG AGCCATCGCT GTCGGGCGTG TTCAGGATGC TACTAGCAAC CAGATGGCCC GTGCGGACAT GACTGACGCC CAGCTTGCCG GCTGGCTTGA AAAAGACGGG TCCGTAACCG TCCAAGGTAC CGCTGCGCGG CACGCCCGCC TGCATCTGGG CGAAAATGCC ACTGTGGATG CCGCAAGCAT TACCGGCGGC TCCGCGGCCG TAACCGGCAA GGTCACTCTT TTGGGCGAAG GCAGCATTCA GGCGCAAAAC ATAAAGCTGA CCGGCGATGC ACTCGCCATT GACAGCACCG GGTCCCAGGG TAACCGCATC AAGGCCAACA GCCTTGCCCT TACGCCGGAT ACTCCGGATG CGGACTTTAC GCTTGCGTCC GGCGAGCTTT TTCTCAAGGG CGAGGCAGGC TCCGCGCTCG GCTTCGCGGG CAGCGAAGGC AAGGGTCTGC AAATAGCCGA CAAGGGCATA CTGAAGCTTG GCGAGGATGC AAATCCCGGC GGCGACATCA ATGCCAACGT TACGAGCGAG GGCGTAGTTG ACGTTGCCCA GGGCAAGTGG ACGCTGGCCG CAGGCAAGAC GCTGGATATC CAGGATGGCA GCCTCACCGT TGGCGGCGGA CACGATGGGC GCTCTGCCGA ACTGAACATC CAGGGCGACC TGAAGAGCAG CGCAGAGGGT GATGTCGGCC ACGACAACGG CGTCAACGTC ATGAATAACG GCGTATTGTC AGGCGATGCC GAAAAATTTG TCACATACAC AGACGACGTT GCTGCCATCG CAGCGGGCCT CGAAAAAATA CATGTGGCCA ATGGCGGTAC GCTGCGGCTT GACGGGCTGG AAAGCGTCAA TACCCAGCAG ATGCAGAGCA CAAAAACCGG CCTGCTGACT GCGGGCAGCA GCGGCCTTAT CAGCTATGGC GCCGCCGCCA TAGAAATATC AGACGCCGAC AAGGGAACCA GCGACGGTAG CATCACAGGT GCCGCGGCAG AAGCCACCAG CGCAGTGCTG GCCGGTATAA ATGCGGAATA TGCCAGCACA GGCGACGCCA TCACCGTGGG CGGCGGCTTC GGCGTTGATG CTCTTGTCGT TACGGGCAAC ACCGGCGATG TCGCTGCCGC CATCAACGGC AACCTTACCC TGCTTGGCAA TGGCGGCCAG TTGATCATCG CTGAAGGCGA TGCGACCACC AATGTCAGCA TCGCTGCCGG AAAAAACCTC AACCTTGGCT CCACGGGCGC GCCATCCAAC GGCGGCACAC TTAACGGCAA CGTGGAGCTG GCCGGAGCTG GCTCTGCCCT TAATGTCGCT GCCGCAGACT ATACTGTGGG CGACATCACT GCTGGCGCTG CCGATACCGG CAATGTGAAC GTCAGTGCTG GCGGGGGCCT TACTGCCGGG GCTATCGGCA CTGCCACCGA GGCGGTCAGC AGCGTTAGCG CCGACAAGGG CGCTCTTGCG GCAACGTCCA TTGATGCGGG AAACGTAACC GCGGATAACG GCGGCACGAT ATTGTCCACG GGCAACATCA CTGCCGGCGG CGTGAACGTG AATAACGGCA GCACTGTCGC TTCTGCTAAG ACCCTTAATA CCAGCACGGT ACTTGTTACC GATGGCAGCA TCGAGGCCAA GACGCTTACG GCCTCCGCAG ATGTGACGGT TGCCAACGGC AAACTGCTTG CCACCGGCAC CGTTACTGAC GCCAGTACGG TGGCAGGCAA CCTTACCCTG ACCGACAGCG AAGCCGCTCT CGGCGACATG GCTGTAACCG GCACTGCCGC CATTACCGGC AGCAACATTG TGGCCCAGAG CCTTGCAGTG GATGGCGCAG TCAACGTCAC CGGCGGCAGC CTTGTGGCTG AAAGCCTTGC TGTGGCCGCT GACGCCGCCT TCATTGACGG CGCGCAGGTC AAGGCCGACA AGCTGACCGG AGCATCGGGC AAAACCATTG CTGTCGGCGA CGCCGATGAT ACAAAGGGCG GCACGACCCT CACCGTGGGC AGCCTGAATC TGGCCGGCGG CAATCTCTAT GTGGACCCTG CCTGGGGCCT GGCCTCAAGC AACGTGGCTG TAGGCGGCTT TACGGGCGCA ACAGCCGCTG ATGTCGAAAT CAACGGCAAC GTGGGCGTGG GCATGAACTC TATGGCTGCC ATCGGCACCA CCAACATGGG CTGGCTTGCC GGACAGGTAC AGGAGGCCAC CAACGGCGCG GGCCTGACAG AAAACGGCGT GGACTCCGCC CTGGGCATCT ACAGTGCCCA GGTGCTTGAC GGCGCTCACG GCATTATTGT GGACGGCACA AAAACAACCG CGGACTTTAC CGCCACCCCG CCGGCCGCCA ATCATCTTGA TTTCTCCGGC AAGTCCCTTC TGGTGGTTAC CGCTGCCGCC GCCGTCACCC CTGACGGAGC CATCAGCAGC AACACCGCAG GCGGCACAGC CAATATCGGC GATGGCGCAA AACTGCGTAT TACTGATGCC AAAGTGGGTC AGGACTATAC TGTGCTCGGC ACCAATATAG ACACAATCAC CCTTGGCACT GACGGAACAG GCTGGACAGG TTCCAACTTC ATCACTGACT CGCGCATGAT CAACGGTTCG TTTGATGCCG CCACCGGCGT GCTGAGCACG GGGCTCAATT CTGCCGCCAA CGTTTACCCC AAGCTTGACG GCGACCTTGT AAAGGTGCTG GACAATGCCT ACACCGCCGA CCATGTCGGT CCCGCACATG TGGACTCCGA CGTGAAGGGC GTGCGCTTCC TGTCCCGTGC CACCAGCGAC AACTTCATCG GCAATGATGC CAATCTGGCC GCCAAAACCA TTGAAAGCGC CGCCCGCATA GCCGTAGCCG GGGCAGTACC GCAAATGACA ATGGCCGCCA ACAATGCGGC GGGCGCTGCC ATTACCCAGC GCACCAGCAT AGCCCAGCCT GACGGCAACG GCATGCAGTC CGTTTCGCTC AACAAGGCGG AAGGCGCGGC CAAAAACGGC ATGGCCCTGT GGATCATGCC CCTGTACCAG AACCAGAATG CCTGGAGTAT GGAAGCCGGC GACAGCTACG ACCTCAAGTG GCACGGTGGT CTTGGCGGTG TGGCCCTTGG CGGCGACTAT ACCTTTGATA ACGCCCTGCG CGCGGGCATA GCCTTCAATA TCGGCGGGGG TTACGCCGAA GGCGAAGGCG ATCTGGCAAA AACCACCAAC AGCTTCAGCT TCTGGGGCCT TGGGGCGTAC GCCGGATGGG CGAAGGAAAA CTTCGGCCTC ACTGCCGACG TCAACTACAC CAGCACCTAT AACAAGGTGA AGCAGGAACT GCCCGGAGCC ATGCAGATGC GCGACCTCAA GAGCGACATC ACGGCATACG CCCTGAGCAC CGGCCTGCGT GCCGAATACA AGCTCAATAC CCAGTATGTG GACATCATCC CCCACCTGGG CGTGCGCTAC ATGTACGTGA GCACCGACTC CTACGACGTG AAGAGCAACG GCACCGTCAT GCGCGGAGAT GAAATGAACC AGAATATCTG GACATTCCCC ATCGGCGTGA CCTTCAGCAA GCAGGTTGAA ACCGGCAACG GCTGGTACGT GAAGCCCAAC CTTGACCTCG GCATCATTCC CGCCACCGGC GATATTGAAG CCAGGAGCAA GATCCGCTTT ACCGGAACCG GCACCAAGGC CGAGCTGGAC ACCCATACAA TGGATTACAT GAGCTATACG GGCGGCCTTG GTCTTGACTT CGGCAATGAC AACCTGAGCC TTGGCGTGAA CTACAACATA CAGGCCTCTG AGCACAGCAC CTCGCACGGC GTGTTCGGCA CTGTCCGCTA CGAGTTCTAG
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Protein sequence | MILSKNAVGN LINRYKAVLG KCRLINTFGS LALAAALTLG STGLAMAADW DGGNLTVGSG GDQTSLAVNS DAVALTGTLT ITDGGTVTVN IPGSISAGDG ATPSNGKLLV TGGTLNVNGY SDSRDLQITG GTVNINGTNG NGWRENGLGG YAETTDENDA AISTGLPTLV SGPNTVVNIT SANLFGGAAA DFATAQLKIA DGATVNLMGL SPDENHTKDF DDAGMLFTGK GAASLDKDSA NLLITGDSTR INVAQGNHGV FNAGVTHITD GATVDVQGGL LLTGFLNTPP SEPGKTVTGA MPGALDGYTR VTDGGSILVG NKGHLFLNKG MTLDVAADGV LDNGGKVNLY ADSTLAYSAG GDHKLTGIVA NAGTLSVTDA HLDLTGAELE KFSGTAGAIA VGRVQDATSN QMARADMTDA QLAGWLEKDG SVTVQGTAAR HARLHLGENA TVDAASITGG SAAVTGKVTL LGEGSIQAQN IKLTGDALAI DSTGSQGNRI KANSLALTPD TPDADFTLAS GELFLKGEAG SALGFAGSEG KGLQIADKGI LKLGEDANPG GDINANVTSE GVVDVAQGKW TLAAGKTLDI QDGSLTVGGG HDGRSAELNI QGDLKSSAEG DVGHDNGVNV MNNGVLSGDA EKFVTYTDDV AAIAAGLEKI HVANGGTLRL DGLESVNTQQ MQSTKTGLLT AGSSGLISYG AAAIEISDAD KGTSDGSITG AAAEATSAVL AGINAEYAST GDAITVGGGF GVDALVVTGN TGDVAAAING NLTLLGNGGQ LIIAEGDATT NVSIAAGKNL NLGSTGAPSN GGTLNGNVEL AGAGSALNVA AADYTVGDIT AGAADTGNVN VSAGGGLTAG AIGTATEAVS SVSADKGALA ATSIDAGNVT ADNGGTILST GNITAGGVNV NNGSTVASAK TLNTSTVLVT DGSIEAKTLT ASADVTVANG KLLATGTVTD ASTVAGNLTL TDSEAALGDM AVTGTAAITG SNIVAQSLAV DGAVNVTGGS LVAESLAVAA DAAFIDGAQV KADKLTGASG KTIAVGDADD TKGGTTLTVG SLNLAGGNLY VDPAWGLASS NVAVGGFTGA TAADVEINGN VGVGMNSMAA IGTTNMGWLA GQVQEATNGA GLTENGVDSA LGIYSAQVLD GAHGIIVDGT KTTADFTATP PAANHLDFSG KSLLVVTAAA AVTPDGAISS NTAGGTANIG DGAKLRITDA KVGQDYTVLG TNIDTITLGT DGTGWTGSNF ITDSRMINGS FDAATGVLST GLNSAANVYP KLDGDLVKVL DNAYTADHVG PAHVDSDVKG VRFLSRATSD NFIGNDANLA AKTIESAARI AVAGAVPQMT MAANNAAGAA ITQRTSIAQP DGNGMQSVSL NKAEGAAKNG MALWIMPLYQ NQNAWSMEAG DSYDLKWHGG LGGVALGGDY TFDNALRAGI AFNIGGGYAE GEGDLAKTTN SFSFWGLGAY AGWAKENFGL TADVNYTSTY NKVKQELPGA MQMRDLKSDI TAYALSTGLR AEYKLNTQYV DIIPHLGVRY MYVSTDSYDV KSNGTVMRGD EMNQNIWTFP IGVTFSKQVE TGNGWYVKPN LDLGIIPATG DIEARSKIRF TGTGTKAELD THTMDYMSYT GGLGLDFGND NLSLGVNYNI QASEHSTSHG VFGTVRYEF
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