Gene Ddes_1871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1871 
SymbolpyrB 
ID7285586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp2254818 
End bp2255774 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content61% 
IMG OID643582692 
Productaspartate carbamoyltransferase catalytic subunit 
Protein accessionYP_002480445 
Protein GI220905133 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0540] Aspartate carbamoyltransferase, catalytic chain 
TIGRFAM ID[TIGR00670] aspartate carbamoyltransferase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.861301 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACCG ACAATCGCTA CCATTGGCCG CACAAGGACC TGCTGGATGT AACGCAGCTG 
AGCAGGGCGG ATACCCTGCA TCTGCTTGAT CTGGCCGCCA GCTTTCAGGA AATAAACAGC
CGCCCGGTCA AAAAGGTGCC CACTCTCAAG GGCAAGACCG TGGTGCTTTT TTTTGTGGAA
AACAGCACAC GCACCAAAAC TTCCTTTGAT GTGGCGGGCA AGCGCCTTTC GGCAGACACG
TTTGCGCTGG GCAAGAGCGG CTCAAGCCTC AACAAGGGCG AAAGCCTCAA GGATACGGCC
CTGACACTTC AGGCCATGTC GCCGGATGTC ATTGTCATGC GTCATTCCAG CAGCGGCGCG
GCTCGCTATG TGGCAGACCT GCTGCCCTGC GGCGTGGTGA ACGGCGGCGA TGGCTGGCAT
GCCCATCCCA CACAGGCGCT GCTGGACTGC TTCAGCCTGC GTGAAGCGTG GGCGAATTCC
TTTGAGGGCC GTACCCTGCT TATTCTGGGC GATATCGCAC ACAGCCGGGT GGCGCGTTCC
AATATCCACC TGCTTACCAG CCTTGGCGTA CGCATACGGG TGTGCGCTCC GCGCACCCTG
CTGCCTGCCG GGGTGGACCA CTGGCCGGTG GAGGTATATA CCGATCTGAG ACAGGCGGTG
CGCGATGTGG ACGCCGTAAT GTGCCTGCGT TTGCAACTGG AGCGCCAGCA GGCCGGGCTT
TTGCCCGATC TGGCCGAATA TTCGCGGCGC TTCTGCCTTG GCCTTGAACA CATGGCGCTG
GCCCGGCCCG GCGCCGGTGT GCTGCACCCC GGTCCCATGA ACCGGGGACT GGAAATTTCA
GACGATATGG CTGATGCCCC CGCAAGCCTG GTGCTTGATC AGGTGGCTGC GGGCGTGGCC
ACGCGCATGG CAGTGCTGTA TCTTCTGGCC ACGCGCAATG ATGGAGGACG CGCATGA
 
Protein sequence
MNTDNRYHWP HKDLLDVTQL SRADTLHLLD LAASFQEINS RPVKKVPTLK GKTVVLFFVE 
NSTRTKTSFD VAGKRLSADT FALGKSGSSL NKGESLKDTA LTLQAMSPDV IVMRHSSSGA
ARYVADLLPC GVVNGGDGWH AHPTQALLDC FSLREAWANS FEGRTLLILG DIAHSRVARS
NIHLLTSLGV RIRVCAPRTL LPAGVDHWPV EVYTDLRQAV RDVDAVMCLR LQLERQQAGL
LPDLAEYSRR FCLGLEHMAL ARPGAGVLHP GPMNRGLEIS DDMADAPASL VLDQVAAGVA
TRMAVLYLLA TRNDGGRA