Gene Ddes_1806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1806 
SymbolguaA 
ID7285519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp2180668 
End bp2182203 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content60% 
IMG OID643582626 
ProductGMP synthase 
Protein accessionYP_002480381 
Protein GI220905069 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0518] GMP synthase - Glutamine amidotransferase domain
[COG0519] GMP synthase, PP-ATPase domain/subunit 
TIGRFAM ID[TIGR00884] GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit
[TIGR00888] GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.150874 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCAGCA AGGTCATTAT AATAGACTAC GGCTCACAGG TTACCCAGCT TATCGCACGC 
CGTGTGCGTG AGGCCGGGGT ATACTCCGAA ATTCATTCCT GCGTGACCAC CGCCCAGCAG
GTGGCCGCCA TGAAGCCCCA GGCCATCATC CTTTCCGGCG GCCCCGCCAG CGTGGGCGAA
GCCGACGCAC CGGCGCTGGA CCCCGGTTTT CTTGAACTGG GTGTGCCCGT GCTCGGCATC
TGCTATGGCA TGCAGCTTCT GGCCCGCGAG ATGGGCGGGC AGCTGGCCCA GTCTCTCACG
CGCGAATACG GCCCGGCCGA CCTCAATTTC ACCGCACCCT GCGCCCTGTG GGAAGGTATC
ACCGCACCCA CCCGCGTATG GATGAGCCAT GGCGACAAGG TGATGGCCCC GCCGCCCGGC
TTTACGGTTA CTGGCAGCAC CAGCACCCTT GAAGTGGCCG CCATGGCCGA TGAGACCCGC
AAAATCTACG CCGTGCAGTT CCATCCCGAA GTGCACCACA GCGTGGACGG CGAGCGCATG
CTGCACAACT TCCTGTTCAA GGTCACGGGC ATCAAGCCCG ACTGGACCAT GTCCTCCTTT
GTGGAGCGCG TAGTCAAGGA AATGGCCGAG CAGGTGGGCG ACAAGCACGT GGTCTGCGCC
CTTTCGGGCG GTATCGACTC CACAGTGGTG GCCGTGCTGC TGCACAGGGC CATAGGCAAG
CGCCTGCACT GCATCTTTGT GGACAACGGC CTGCTGCGTC TTGGCGAAGG TGATGAGGTG
GTCAGCTACC TGCGCGAGCA TTTTGACCTC AACCTCAACT TCGTGCAGGC GCAGGAGCGC
TTTCTTTCCA AGCTCAAAGG CGTGGAAGAC CCCGAAAAGA AACGCAAAAT CATCGGCCAC
ACCTTTATTG AAATTTTTGA TGAAGAAGCC AACAAGCTGG ATCAGGTGGA CTTTCTGGCT
CAGGGAACCC TGTATCCCGA CGTCATTGAA TCCATTTCCC ACAAGGGACC CAGCGCCGTC
ATCAAGAGTC ACCACAATGT GGGCGGCCTG CCCGACACAA TGAAGCTCAA GCTTATTGAA
CCCCTGCGTG AACTCTTCAA GGACGAAGTG CGCAAAGTGG CGGCCGAACT CGGCATGCCC
GACTCCATCG TGTGGCGGCA TCCCTTCCCT GGTCCCGGCC TTGCCATCCG TGTGCTTGGC
GAAGTGAGCG AAGAACGCCT CAACATCCTG CGCCAGGCCG ACAGGATCGT GCAGCAGGAA
CTGCGCGAAT CCGGCTGGTA TCGTAAGGTC TGGCAGGGCT TTGCCGTGCT GCTACCCCTC
AAGACCGTGG GCGTTATGGG CGACGGGCGC ACCTATGAAC ATGTGGTGGC CCTGCGCGTG
GTCGACAGCG TTGACGCCAT GACAGCAGAC TGGGCGCGCC TGCCCGCTGA TCTCATCGAG
CGCATGTCGG GCCGCATCAT CAATGAAGTC AAGGGCGTCA ACCGTGTGGT TTACGATGTG
TCCTCCAAAC CGCCCAGCAC CATTGAATGG GAATAG
 
Protein sequence
MPSKVIIIDY GSQVTQLIAR RVREAGVYSE IHSCVTTAQQ VAAMKPQAII LSGGPASVGE 
ADAPALDPGF LELGVPVLGI CYGMQLLARE MGGQLAQSLT REYGPADLNF TAPCALWEGI
TAPTRVWMSH GDKVMAPPPG FTVTGSTSTL EVAAMADETR KIYAVQFHPE VHHSVDGERM
LHNFLFKVTG IKPDWTMSSF VERVVKEMAE QVGDKHVVCA LSGGIDSTVV AVLLHRAIGK
RLHCIFVDNG LLRLGEGDEV VSYLREHFDL NLNFVQAQER FLSKLKGVED PEKKRKIIGH
TFIEIFDEEA NKLDQVDFLA QGTLYPDVIE SISHKGPSAV IKSHHNVGGL PDTMKLKLIE
PLRELFKDEV RKVAAELGMP DSIVWRHPFP GPGLAIRVLG EVSEERLNIL RQADRIVQQE
LRESGWYRKV WQGFAVLLPL KTVGVMGDGR TYEHVVALRV VDSVDAMTAD WARLPADLIE
RMSGRIINEV KGVNRVVYDV SSKPPSTIEW E