Gene Ddes_1686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1686 
Symbol 
ID7285390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp2030005 
End bp2031210 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content59% 
IMG OID643582499 
ProductFAD dependent oxidoreductase 
Protein accessionYP_002480262 
Protein GI220904950 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.470832 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGCA AACATGCGGC CGGTGCCGTT GTCATTGGCG GGGGTGCCGT CGGTACGGCT 
GTGGCCTGCT ATCTTGCCAT GGACGGGGTG GATGTCGCCC TTGTTGAACG CGGCGAATTC
GCCTGGGGTT CCAGCCGCCG TTGCGATGGT CATGTGGTCA CCTATGACAC GCCGCCAGGC
GCATACAGCC GGTTCTGCAA GTGCGGGCAG GACATGTTTC ATGATGCCGC AGATTTTCTA
CCCGTAGATT TTGAATTTTG CCCCGAAGGG CTTGGCCTGC TGGTTGATGA TGAGCGCGAC
CTTGAAGCCG TGCGCGCCAA CTACGAAGGC AAGAAAAAAG AAGGCATAGA CGTGACCCTG
TGGGACAGAA ACGAGCTTCG CCACCACGAG CCAAATATCG GCGACAGCAT CCTGGCCTGC
CTGAATTTCA ATGGCGACTG CAAGCTTAAC CCCATGCGTC TTTGCCAGGG CCTTGCCATG
CATGCCAGGG CCAACGGAGC GGTACTCATG ACCGGAACCC GGGTCACCGG GCTGCAGATG
GAAAAAGGCC GCATTACCGC CGTGGAAACG GACAAAGGGC GTATATACGC GGCCAATGTC
GTCCTTGCGG CGGGCGTCTG GACGCCCGGC CTTGCCCATA TGGCTGGTCT CGCCGTTCCC
GTCCGCCCCC GGCAGGGTCA TGTGCTGGTC ACCGAACGGG TTCGTAATCT GGTGGGCAAA
AACTACGCTG AATACGGCTA TCTGCTGGCA AAAGGCGGAA AAACCAGGGA CACCATCACC
CCTGAAATGG AGCAGTTCGG CGTGGCTTTT GTACTTGAGC CTTCCCATGC CGGAACTGTC
CTGCTGGGCA GCAGCCGCCG CTATGTGGGG ATGGACATCC GCCCCAACCC CGCAGTCATG
CGCGCCATTG CCCAGCGCGC CCGTCATTTT TATCCCTCTC TGGCCCAAAC GCGCCTCATC
CGCTGCTATG CGGGCCTTCG GCCCTGCACT CCGGATGCCA AACCCATTAT ATCGCCCACC
CATATCAAAG GCCTTTTTGT GGCGACAGGC CATGAGGGCA ACGGCATAGG GCTTTCCCTT
ATCACCGGCA GGCTCATTGC GGAAATGGTG CGCGGACAGT CCCCGTTTAT GGACATAAGC
AACATGAGTC TTGACAGGTT CGGGCTTAAC CCTGCGGCCC ATACTCCAGA AACGGCTTCC
GCCTGA
 
Protein sequence
MSSKHAAGAV VIGGGAVGTA VACYLAMDGV DVALVERGEF AWGSSRRCDG HVVTYDTPPG 
AYSRFCKCGQ DMFHDAADFL PVDFEFCPEG LGLLVDDERD LEAVRANYEG KKKEGIDVTL
WDRNELRHHE PNIGDSILAC LNFNGDCKLN PMRLCQGLAM HARANGAVLM TGTRVTGLQM
EKGRITAVET DKGRIYAANV VLAAGVWTPG LAHMAGLAVP VRPRQGHVLV TERVRNLVGK
NYAEYGYLLA KGGKTRDTIT PEMEQFGVAF VLEPSHAGTV LLGSSRRYVG MDIRPNPAVM
RAIAQRARHF YPSLAQTRLI RCYAGLRPCT PDAKPIISPT HIKGLFVATG HEGNGIGLSL
ITGRLIAEMV RGQSPFMDIS NMSLDRFGLN PAAHTPETAS A