Gene Ddes_1541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1541 
Symbol 
ID7285239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp1843261 
End bp1843968 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content55% 
IMG OID643582352 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002480121 
Protein GI220904809 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2011] ABC-type metal ion transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.104084 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGATC AACTGAGCAC CCTCGCCCAA CTGGCCCAGG ACATGCACCC CTTGTGGGAA 
CGCTTGCAGG ACAAAATGCC GGAAATTCTC ATGGCCACCT GGGAAACCGT GCAGATGGTG
CTGATTTCGA CCTTTTTTTC TCTGGTTATC GGCTTCATGC TGGCAATCCT GATGATCGTG
ACCAATCCCA TCGGCCTGAA ACCCTGCCGT TCGGTCTACA GAATAGTGGA CTTTGTGGTG
AACCTTCTGC GTTCGTTCCC GTTCATCATT CTGCTGATCG CCATCATACC CTTTACGCGC
ATGGTGGTAG GCACCTCTAT CGGCAGCGGG GCGGCCATTG TGCCTCTTAC CATTGCGGCG
GCCCCCTTTG TGGCACGGCT TATCGAAACC TGCTTTCTTG AGGTGGACAG GGGCGTTATC
GAGGCGGCCC GGTCGTTTGG GGCCAGCAAT GCCCAGATCA TTTTCCGGGT GCTTTTTCCC
GAAGCCCTGC CTTCCATCGT GCTCAACATC GCGGTCATCG CCATTACCCT GCTCGGTTAC
TCTGCCATGG CGGGAACCGT AGGCGGTGGC GGCCTGGGCG ACCTGGCCGT CAAATACGGC
TACAACCGCT TTCAGGTTGA TATCATGGTC TATTCCGTTA TCATCCTGTG TGTGCTGGTG
CTGCTTATCC AGAGCATCTG CAACTTTTTG TACAAAATTC TGCGATAA
 
Protein sequence
MSDQLSTLAQ LAQDMHPLWE RLQDKMPEIL MATWETVQMV LISTFFSLVI GFMLAILMIV 
TNPIGLKPCR SVYRIVDFVV NLLRSFPFII LLIAIIPFTR MVVGTSIGSG AAIVPLTIAA
APFVARLIET CFLEVDRGVI EAARSFGASN AQIIFRVLFP EALPSIVLNI AVIAITLLGY
SAMAGTVGGG GLGDLAVKYG YNRFQVDIMV YSVIILCVLV LLIQSICNFL YKILR