| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1533 |
|---|
| Symbol | |
|---|
| ID | 7285231 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | + |
|---|
| Start bp | 1830506 |
|---|
| End bp | 1831177 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643582344 |
|---|
| Product | CBS domain containing membrane protein |
|---|
| Protein accession | YP_002480113 |
|---|
| Protein GI | 220904801 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3448] CBS-domain-containing membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.279871 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTATAT TAGACTGGAT GAAGCCCCAT GTAATCACTG TCGTGCCTGA CACCTCCCTG
CTGCAATGCA GAAAACTCCT TAAGGACAAC CGGATCAACT ACCTGCCCGT GGTGGACCGG
GATAACATAG TAGTTGGGCT TATAGCCTCT GCTGACCTCA AGGCTTTTGC CCCACAACAC
ACTACCGGCT TTGAGATTCT TGAAGCCCTG GACATTCTGG CCGAAACAAA GGTCAAGGAT
GTCATGGTGG TCGCCCCTGT TACCATCCAT TACAACAATA CCGTGGAACA GGCGGCAAAA
ACCATGTTTG ACAGGCACGT AGCCTGCCTG CCTGTCATTG ACGATGAGGA CAAGCTGGTC
GGCATCATCA CGGGCTGGGA TATTTTCCAC GCTCTGCTCA ACATGAGCGG AGCGGAACAG
GGCGGCGAAG AAGCGGGCTT TGTTCTGCCC AACCAGCCCG GCACCATCCG CGAAATTCTG
GATACCCTCA AAACGCACGG CATGAGCGTC ATTTCCGTGC TCTCGGCCGC CGCTGACAAC
GGCATGCGCC AGGTGAAAAT CCGCTTTCGT GCCCAGGATG CCGCCGCCCT GGATGACACC
TTTGAAATAC TCAAACAACA TAGCGGCTTG CGCTATTGGG CAAGAGACGG CAAAGTTCAT
ATGAAAGACT GA
|
|---|
| Protein sequence | MLILDWMKPH VITVVPDTSL LQCRKLLKDN RINYLPVVDR DNIVVGLIAS ADLKAFAPQH
TTGFEILEAL DILAETKVKD VMVVAPVTIH YNNTVEQAAK TMFDRHVACL PVIDDEDKLV
GIITGWDIFH ALLNMSGAEQ GGEEAGFVLP NQPGTIREIL DTLKTHGMSV ISVLSAAADN
GMRQVKIRFR AQDAAALDDT FEILKQHSGL RYWARDGKVH MKD
|
|---|
| |