Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_1493 |
Symbol | |
ID | 7285191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | - |
Start bp | 1783393 |
End bp | 1784391 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643582304 |
Product | secretion protein HlyD family protein |
Protein accession | YP_002480073 |
Protein GI | 220904761 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.172966 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAATCT CTCGTAAGGT TGCGGGTGCG GCTGCCGTGG CGGCCGTATT GCTGGCAACT TTTTTTATCT TGTTCTGGCT GAGCGGGCGA AATAGCGCCG CACTCACACT CTACGGCAAT GTGGATATCC GCCAGGTCGA CCTGTCTTTC CGGGTCGGCG GGCGCATTGC AGACGTGCTG GTGGATGAGG GAGCCTCTGT GGTTCGCGGG CAGGCCCTTG CGTGTCTGGA TGCCGATATG CTTACGCAGC AACGGGACGA GGCCGCCGCA TATCTGGAGG GCCAACGGGC CGCTCTTATG CGTCTTGAGC GTGGTTACCG TGTGGAAGAA ATCGCTCAGG CCCGGGCGTC GGTGAGTGCG GCCACGGCCC TGGCGGAAAA TGCGGCCATC AACCTGCGCC GCGTTGTCGC CATGCGTTCT TCCAACGCCA TTTCACAAAA AGAGCTGGAC AATGCCCGGG CGCAGTCCCG CGAGGCATCC GCAAAGCTGC GTTCTGCCCA GGACCAGCTT GATATGCTCC TCTCCGGCTA CCGGGAAGAA GATGTGCTTG CGCAGCGCGC TTCTGTTGAT GCGGCGGCTG CAGCGCTCAA GCGGGCAGAA ATACAGTTGA ACGATGCCGT ACTGACCGCC CCGCAGAAGG GTGTGGTGCT CACCCGCGCC CGTGAGGCCG GGGCCATTGT CCAGTCCGGG CAGACGGTTT ACACCCTTAC TCTTACGGAT CCGGTCTGGC TGCGGGCCTA TGTGGATGAA CCGGAGCTTG GCCGCATCAA GCCTGGCATG CCTGTGCGCG TTCTTGTGGA CGCGGCCCCG GGAAAGAGTT TTCCGGGAAC CGTTGGCTTT ATCTCGCCAA CAGCGGAATT TACCCCGAAA ACAGTTGAAA CCAGGCAGGT GCGCACAGCT CTGGTCTACC GCTTGCGGGT GCAGGTTGAG GACCCGGAAA ATGTCATGCG CCAGGGCATG CCTGTAACCA TTCTTGTGGA CGGTGCTGAC GCGCCATGA
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Protein sequence | MQISRKVAGA AAVAAVLLAT FFILFWLSGR NSAALTLYGN VDIRQVDLSF RVGGRIADVL VDEGASVVRG QALACLDADM LTQQRDEAAA YLEGQRAALM RLERGYRVEE IAQARASVSA ATALAENAAI NLRRVVAMRS SNAISQKELD NARAQSREAS AKLRSAQDQL DMLLSGYREE DVLAQRASVD AAAAALKRAE IQLNDAVLTA PQKGVVLTRA REAGAIVQSG QTVYTLTLTD PVWLRAYVDE PELGRIKPGM PVRVLVDAAP GKSFPGTVGF ISPTAEFTPK TVETRQVRTA LVYRLRVQVE DPENVMRQGM PVTILVDGAD AP
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