| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1448 |
|---|
| Symbol | |
|---|
| ID | 7285144 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | + |
|---|
| Start bp | 1735831 |
|---|
| End bp | 1737240 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643582257 |
|---|
| Product | peptidase M48 Ste24p |
|---|
| Protein accession | YP_002480028 |
|---|
| Protein GI | 220904716 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.749654 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCATT ATTGCGCCCC GCGCCGCTGG ACGGCCCTGC TTGTGTTGCT GGCTTTTCTG
CTGCCGCAGA TCTGCCCCGC GCCCGCGCAG GCATTCTTCT TCGGCGGCGT GACCATCAAA
GACGAAAAGG AGATGGGAAA AAAATTCGAT GTAATGGTGC GGTCAAACCT GCCTATCATC
GAAGACCCGG AGGTAAAGCA GTATGTGGAC TATATGCTGG GCAGGCTGGT CAAAACCATT
CCTCCGCAGC CGTTCACCTT TACTGCCAGC ACCATACTGC ACAACTCCCT TAACGCCTTT
GCTGTACCCG GCGGCTATGT TTACGTGTTC ACCGGTCTGA TAATGAACCT GGACAAGGAA
GAAGAACTGG CCGGCGTGCT GGCCCACGAA CTGGCCCACG TCACCCAGCG CCATGTGGCC
TCACGGCTGC AACGCGCCCA GTTCGTCACC CTCGGCTCCC TGCTGCTGGC CGTAGCGGGC
GTGGCGGCGG GTGGCGCGGG CGGCGGAGCC ATGGCCGTCG GGGCCATGGG GGCTGGGCAG
TCCGCCATGC TGAATTACAG CCGCATGGAT GAAAATGAGG CCGACCATAT CGGCCTGCAA
TATCTTATCG CCGCAGGCTA TCCACCGGGC GGCATGGTGG GCGGCTTCAA GGTACTACGG
CAGAAAAGCT GGATGAGCGG CATAAGCGTG CCCACATACC TTTCCACCCA CCCCGCTCTG
GGCGACCGCA TCAACGGCCT TCAGGCCCGC ATCCAGAGCA TGCCCAAGGC CGTGCAGAGC
CGCAGCCAGG ACAACAGACG CTTTACCCGT GTCAAAGCGC TGCTCTGGGC CAGATATGGC
GATGACCAGG CGGCCCTGCA ACGCTTTTCA GGCAATGACG GCCTGTCCAG GATGGGCCGG
GGTATTGTGC TCGCCAGGCA GAACCGTATC AACGAGGCCA GCCAGGCCTT TGACCAGGCT
CTCAAGGCAG CCCCCGAGGA TCCGCTGGTA CTGCGCGAAG CCGGAGCCTT TCACTACCGC
AAGGGTGACA TGAGCCGGGC GGACGGCCTG CTTTCCAAAG CCATGCGGCT GGACCCCAAT
GACTACATGG CCTCCTTTTT CTATGCGCGC ATGCTGGATG AAACGGGCAG GCAGGCGCAG
GCCGCCAGCC ACTACAAGGA CGTGCTGCGC CACGTCCCCG AAGACTCTGA AGTGCATGAG
GCCTATGCAC GCTCGCTCGG CAAGGCGGGC AACACGCCCG ATGCCTACAT CCATATGGCC
TACAGCGCCC TGTACTCCAA CAACAAAAAA CTTGCCGAAC GGTATTTCAA CCAGGCCAAG
AGCATGGCCT CCCGCACGAC GGACAAGCGC GCTTTTCAGC GCCTTGAGAC CGCCTACAAA
GAACGCAAGG AAATATGGGA CAAGAACTGA
|
|---|
| Protein sequence | MLHYCAPRRW TALLVLLAFL LPQICPAPAQ AFFFGGVTIK DEKEMGKKFD VMVRSNLPII
EDPEVKQYVD YMLGRLVKTI PPQPFTFTAS TILHNSLNAF AVPGGYVYVF TGLIMNLDKE
EELAGVLAHE LAHVTQRHVA SRLQRAQFVT LGSLLLAVAG VAAGGAGGGA MAVGAMGAGQ
SAMLNYSRMD ENEADHIGLQ YLIAAGYPPG GMVGGFKVLR QKSWMSGISV PTYLSTHPAL
GDRINGLQAR IQSMPKAVQS RSQDNRRFTR VKALLWARYG DDQAALQRFS GNDGLSRMGR
GIVLARQNRI NEASQAFDQA LKAAPEDPLV LREAGAFHYR KGDMSRADGL LSKAMRLDPN
DYMASFFYAR MLDETGRQAQ AASHYKDVLR HVPEDSEVHE AYARSLGKAG NTPDAYIHMA
YSALYSNNKK LAERYFNQAK SMASRTTDKR AFQRLETAYK ERKEIWDKN
|
|---|
| |