| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1251 |
|---|
| Symbol | |
|---|
| ID | 7284935 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | + |
|---|
| Start bp | 1470077 |
|---|
| End bp | 1470847 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643582050 |
|---|
| Product | protein of unknown function DUF164 |
|---|
| Protein accession | YP_002479832 |
|---|
| Protein GI | 220904520 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1579] Zn-ribbon protein, possibly nucleic acid-binding |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAATG CCGTTTACTT TGATCAGATA AAGCAGCTTG TGGAGCTGCA AAAGGTTGAT
GACGCCATTT ATGCGGTACG GCAGGACATG GAGCGTGCCC CCAATGAGCT GAACTCGCTT
GAGCAGCGTT TCAATGCCAG CGAGACGCAG CGTAACTATA TTGTGGACAA GCTGACCCAT
CTTCAGGAAC AGCAAAAACG CCTTTCACTT GAAATCGATG ATGATGCCGC CCGTATTAAA
AAGAGCAAAA ACAAGCTCAT GCAGGTAGAA AATACACGTG AGTATCATGC AATGATGCGC
GAAATGGACG GCATGGAAAA AGTGAACCGC TCCCGTGAAG AGGAAAAAAT GACTCTCATG
GAAGAGCTGC AGTTCCAAAA AGACGCTTTG GCCGAACTTG ATCTTACGCA CTCTGCCGTC
AAGGCCGAAC TTGAAGTCAA ACGCGACGGT CTTGAAGAAA AACTGCAAAA ATGTACTGCC
GCCCTTGCGG AACTCAATGC AAAACGGGCC CAGGTCAGCA AGCACATCCC CCAGCCTGTG
TTCATGCGCT ATGAGTTTAT CCGCGAACGG CTGGAGCACC CGGTTATCGT GGCTGTCAGG
GAAGGTATCT GCTCGGGCTG CCACATTGCC GTTCCGCCGC AGTCTTTTAT CGAACTGCAG
CGCGGCCAGC AGATTTTAAG TTGCCCCAAC TGCCAGCGCC TCATATTCTG GTGCGAACAT
TTCACCGTTG CTGAGGCGCC TCAGTGTGCG CCCAAGCCGC TGACTGATTA A
|
|---|
| Protein sequence | MSNAVYFDQI KQLVELQKVD DAIYAVRQDM ERAPNELNSL EQRFNASETQ RNYIVDKLTH
LQEQQKRLSL EIDDDAARIK KSKNKLMQVE NTREYHAMMR EMDGMEKVNR SREEEKMTLM
EELQFQKDAL AELDLTHSAV KAELEVKRDG LEEKLQKCTA ALAELNAKRA QVSKHIPQPV
FMRYEFIRER LEHPVIVAVR EGICSGCHIA VPPQSFIELQ RGQQILSCPN CQRLIFWCEH
FTVAEAPQCA PKPLTD
|
|---|
| |