Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_1176 |
Symbol | |
ID | 7284858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | + |
Start bp | 1384224 |
End bp | 1384991 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643581975 |
Product | Triose-phosphate isomerase |
Protein accession | YP_002479758 |
Protein GI | 220904446 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0149] Triosephosphate isomerase |
TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.46526 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACAAGA TTATCGCTGC AAACTGGAAG ATGTACAAAG ACCGTACTCA GGCCGCCACA ACCGCTGGCG AGCTTGCGGC CGTTTTGCCC GAAATTTTAC CTGCGGGACG CGAAGTTATC GTCTTTCCGC CTTTTACCGC CATTGAGAGC GTAGCTCGTG TATTTGACGG TAAAAAAGGG CTGGCTGTGG GCGGGCAGAA TTTTTACCCC GCGCCGGAAG GTGCTTTTAC GGGTGAAATC TCTATTGATA TGCTGCGTGA TGTCGGGGCG CAATGGGTGC TTGCCGGACA TTCCGAACGC AGGCATGTCT TTGGCGAGAG TGATGAGCTT GTGGCCCGCA AGGCTGTGTT TGCCCTTAGC CATGGCCTCA AAACCATGCT TTGCATAGGG GAAAAACTTG AAGAGCGTGA ACAGGGCAGC CTTTATGCTG TACTTGAGCG GCAGCTGACG GCTTTTTTTG AAGCCAGACC CGACGGTATG GCTGGTGAAA CCCTGCCGGG GCGCTTGGCC ATCGCCTATG AACCCGTGTG GGCCATAGGT ACAGGCAAGG TGGCTGGCCC TGGTGAAGTA CGTGAGGCGC ACGGCGTTAC GCGGGCCTTG CTTGAAAGAT TTGTGGGTGA TTCCGGCAAA AAACTGCCGA TTTTGTATGG CGGCAGCGTA AAACCGGATA ATGCCGGAGC ACTTATCGCC CTTGACAATG TGGATGGTCT TTTGGTAGGA GGAGCCTCTT TAGAGGCGCA AAGCTTCTTA CAAATTATCG GGGCCTGA
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Protein sequence | MHKIIAANWK MYKDRTQAAT TAGELAAVLP EILPAGREVI VFPPFTAIES VARVFDGKKG LAVGGQNFYP APEGAFTGEI SIDMLRDVGA QWVLAGHSER RHVFGESDEL VARKAVFALS HGLKTMLCIG EKLEEREQGS LYAVLERQLT AFFEARPDGM AGETLPGRLA IAYEPVWAIG TGKVAGPGEV REAHGVTRAL LERFVGDSGK KLPILYGGSV KPDNAGALIA LDNVDGLLVG GASLEAQSFL QIIGA
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