Gene Ddes_1172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1172 
Symbol 
ID7284854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp1380829 
End bp1381854 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content54% 
IMG OID643581971 
Productrod shape-determining protein MreB 
Protein accessionYP_002479754 
Protein GI220904442 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1077] Actin-like ATPase involved in cell morphogenesis 
TIGRFAM ID[TIGR00904] cell shape determining protein, MreB/Mrl family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.245096 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTTGC GGCGTCTTTT CCGCTTTTTG TCCAAAGACA TCGCTATGGA CCTGGGTACG 
GCCAATACTT TGCTTTACAC TAGGGCGCAT GGCATTGTTG TCAATGAACC CTCGGTAGTG 
GCTCTTGATG CGAATACGGG CAAAATTCTG GCTGTGGGAG CTGCCGCCAA GGAATACATC 
GGTCGCACAC CACGGAGTAT CCGCGCCGTA CGGCCTATGA AAGACGGCGT TATTGCTGAT 
TTTGACGTCA CTCGGGCCAT GATTTCCTAT TTTGTACAAA AGGCCATCAG CGGCCTGCGT 
CTGGTCAGGC CGTCCATGGC CATCTGTATC CCCACCGGAA TTACCCAGGT AGAGAAAAGG 
GCTGTCATCG ATTCCGCCAT GTTGGCGGGG GCTGTTGATA TTTTCATGAT AGAAGAACCT 
ATGGCCGCTG CCATAGGGGC TGACCTGCCC ATTCATGAGC CTTTGGGCAA CCTGGTGCTG 
GATATTGGCG GCGGCACAAG CGAAGTGGCT GTTATTACGC TGTCGGGTGT TGCCAACTCC 
CAGTCCGTCC GGGTGGCTGG CGACACGATG AATCTGGCGG TGCAGCGTTT TATGCGTGAC 
GCCTTTCGTA TGGAAGTGGG TGACAATACC GCTGAAAACG TTAAAAAAAT CATTGGGGCG 
GCTGTTCCCA TGCCCAATGC ACCCATCCTT GAAGTTTCAG GTAAAGACAT GGTGCGTGGC 
TGCCCGCGCG TAGTCAAGGT AACCGAAGCG CATATTCGAG AGGCCCTGCG TGAGCCTGTA 
CAGGCCATTC TGGAAGTTGT CCTGCGCGCT CTCGAAAAAA CACCTCCAGA ACTGGCGGCA 
GATATTTACC GCAACGGCAT GCTCATGGCT GGCGGCGGTT CACTGCTGAA GGGGCTTGAT 
CAGTATATCT CCCGCGAAAC CCGCCTCAAG GTTTTTGTGG ACAAGGATCC GCTTACCACC 
GTACTGCGCG GCACTGCCAG AGCGATGCTT GACCGGGAAA CATACCGCTC CGTTTTTATC 
AATTAG
 
Protein sequence
MFLRRLFRFL SKDIAMDLGT ANTLLYTRAH GIVVNEPSVV ALDANTGKIL AVGAAAKEYI 
GRTPRSIRAV RPMKDGVIAD FDVTRAMISY FVQKAISGLR LVRPSMAICI PTGITQVEKR 
AVIDSAMLAG AVDIFMIEEP MAAAIGADLP IHEPLGNLVL DIGGGTSEVA VITLSGVANS 
QSVRVAGDTM NLAVQRFMRD AFRMEVGDNT AENVKKIIGA AVPMPNAPIL EVSGKDMVRG 
CPRVVKVTEA HIREALREPV QAILEVVLRA LEKTPPELAA DIYRNGMLMA GGGSLLKGLD 
QYISRETRLK VFVDKDPLTT VLRGTARAML DRETYRSVFI N