| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1147 |
|---|
| Symbol | |
|---|
| ID | 7284829 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | + |
|---|
| Start bp | 1350932 |
|---|
| End bp | 1352137 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643581946 |
|---|
| Product | ammonium transporter |
|---|
| Protein accession | YP_002479729 |
|---|
| Protein GI | 220904417 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0004] Ammonia permease |
|---|
| TIGRFAM ID | [TIGR00836] ammonium transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGCCC CTGATACTGC CTTTGTCATT ATCTGCGCCA CCATGGTCAT GCTCATGATT
CCGGCTTTGG CCCTGTTTTA TGGTGGCCTG GTCCGCGCCC GCAATGTTCT TTCCACCCAT
ATGTATAGCT ACGCCTGCCT TGGGCTTGTT TCCGTCCTTT GGGCGCTTGT GGGCTACACA
CTGGCCTTTG GCGACGATAT GGGCGGACTT GTGGGCAATT TCAGATTTGC TCTGCTTGAC
GGGGTGAACG GCAATCCCGC CCCTATGGCG CCGCAGCTGC CGCATACGGT TTTTATGGGC
TTTCAATGTA TGTTTGCCGT GCTCACGGTA GCCTTGATTT CAGGAGCGTA CGCAGAACGT
ATGCGTTTTT CTGCCATGCT GCTTTTCTCT GCCTTGTGGC TGGTTCTTGT GTACGCTCCT
ATGGCTCACT GGGTGTGGGG CGGAGGCTGG ATGGGCCGGA TGGGCGCACT GGATTTTGCC
GGTGGCGCTG TGGTGCACAT GTCTTCGGGA GCCGCCGCGC TTGCCTGCGC CCAAGCCTTG
GGTCCCAGGA TTTCAACCGG CTCACGGCAT GTTCCCCATA ATCTGCCGCT GACGCTTCTC
GGTGGCGGTA TCCTCTGGTT CGGCTGGTTC GGCTTTAACG CCGGCAGCGC GCTGGCCGCA
GGAACCCTTG CGGGGCAGGC GCTGGTGACA ACGCATATGG CGGCGGCATG CAGCATTCTT
GGCTGGATAA TTGTTGAATG GAAGCATACG GGCAAGCCTA CCAGCCTGGG AGCAATCTCC
GGCGCTCTGG CAGGGCTTGT GGCCATTACC CCGGGCGCTG GTTTTGTGGA TGTGCTGCCA
GCCATGCTCA TAGGCTTTAT CGGCGGAATG GTCTGCTACG GCGGTGTATT GCTGAAGAGC
CGGTTCGGTT ATGACGATGC CCTTGACGTC GTGGGCATAC ACGGCCTCGG CGGAACCTGG
GGCGCACTGG CTACAGGTTT GTTCGCCAGC GCGGCAGTCA ATGGCGTGGA CGGTCTTTTT
TACGGAAATC CCGGCCAGGT CTGGATACAG CTTGCATCCA TCGCAGGTAC CTGGGCTTTT
GTTTATGTTG CCACGCGCAT CATTGTCCGT CTGGTGGGCG CAATGGTCGG ATTGCGGGTT
GCCCCCGAGG AAGAGTACAG CGGCCTTGAC CTCGGCGAAC ACAATGAGCG CGGTTATAAT
CTGTAA
|
|---|
| Protein sequence | MNAPDTAFVI ICATMVMLMI PALALFYGGL VRARNVLSTH MYSYACLGLV SVLWALVGYT
LAFGDDMGGL VGNFRFALLD GVNGNPAPMA PQLPHTVFMG FQCMFAVLTV ALISGAYAER
MRFSAMLLFS ALWLVLVYAP MAHWVWGGGW MGRMGALDFA GGAVVHMSSG AAALACAQAL
GPRISTGSRH VPHNLPLTLL GGGILWFGWF GFNAGSALAA GTLAGQALVT THMAAACSIL
GWIIVEWKHT GKPTSLGAIS GALAGLVAIT PGAGFVDVLP AMLIGFIGGM VCYGGVLLKS
RFGYDDALDV VGIHGLGGTW GALATGLFAS AAVNGVDGLF YGNPGQVWIQ LASIAGTWAF
VYVATRIIVR LVGAMVGLRV APEEEYSGLD LGEHNERGYN L
|
|---|
| |