Gene Ddes_0855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0855 
Symbol 
ID7284531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp1002509 
End bp1003351 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content59% 
IMG OID643581651 
Productamidohydrolase 2 
Protein accessionYP_002479440 
Protein GI220904128 
COG category[R] General function prediction only 
COG ID[COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000589459 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATATTG ACATCCACAC CCACGCCTTT CATCCCAAGA TTGCGCACAA GGCGGTGGAA 
CATCTGAACG GGCACTACGC CGTTGCCTGT GCGGGCAACG GCACCATAAC CAACCTGCTG
GAAAATGAGC GCAGGGCCGG TATCGACATG TGCGTGGTAT TGTGCGCGGC CACTGCTCCC
GCGCAAGTCA TTCCGGCCAA CAATTACGCC ATCAGCCTGC AACGGGCGCA TCCAGACAGT
GTGATTGCCT TCGGCACCAT ACACCCCGGC TACGCCCAGT GGGAGGCCGA GCTTGACCGC
ATGGAGGCCG CAGGCATACG CGGCATCAAG CTACATCCGG ACTTCCAGGG CTTCTGGCTC
AGCGACCCGC GCCTTTTGCC TATCTTTGAG GCTGCGCAAG GACGCTTTAT TTTTGAAATG
CACATTGGGG ACAAAATTTC TCCAGAAAAA AACCCCTCCT GCCCTTACAA GCTGGCTGCC
ATTCTGGACG CCTTTCCACG CCTTCAGGTC ATAGCCGCGC ACTTTGGCGG CTACCGCATG
TGGGCGCATG CGCTCAAGGC TTTCGCCGGC AAGAAGCGCC CCAACCTGTG GTTTGACAGC
TCAAGCACCA CGCCGTTTGC CACACCCATG CTTGTAAAAA CCTTGCTGGC CGCCTACCCC
GCTGACAGGA TACTTTTCGG CACGGACTGG CCGCTGTATG ATCCCCTGGA TGAAAAACAC
AGGCTTCAGG AAAAAGGCGG CCTGAGCGAC AGCATGCTGG AACGGCTCAT GAGCAACGCC
GCAACCATAC CGGGCCTGCT GCCCCCGCAA ACCGGACAGG CGGAACAAGC CATCAGGCAT
TGA
 
Protein sequence
MHIDIHTHAF HPKIAHKAVE HLNGHYAVAC AGNGTITNLL ENERRAGIDM CVVLCAATAP 
AQVIPANNYA ISLQRAHPDS VIAFGTIHPG YAQWEAELDR MEAAGIRGIK LHPDFQGFWL
SDPRLLPIFE AAQGRFIFEM HIGDKISPEK NPSCPYKLAA ILDAFPRLQV IAAHFGGYRM
WAHALKAFAG KKRPNLWFDS SSTTPFATPM LVKTLLAAYP ADRILFGTDW PLYDPLDEKH
RLQEKGGLSD SMLERLMSNA ATIPGLLPPQ TGQAEQAIRH