Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_0855 |
Symbol | |
ID | 7284531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | - |
Start bp | 1002509 |
End bp | 1003351 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643581651 |
Product | amidohydrolase 2 |
Protein accession | YP_002479440 |
Protein GI | 220904128 |
COG category | [R] General function prediction only |
COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000589459 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATATTG ACATCCACAC CCACGCCTTT CATCCCAAGA TTGCGCACAA GGCGGTGGAA CATCTGAACG GGCACTACGC CGTTGCCTGT GCGGGCAACG GCACCATAAC CAACCTGCTG GAAAATGAGC GCAGGGCCGG TATCGACATG TGCGTGGTAT TGTGCGCGGC CACTGCTCCC GCGCAAGTCA TTCCGGCCAA CAATTACGCC ATCAGCCTGC AACGGGCGCA TCCAGACAGT GTGATTGCCT TCGGCACCAT ACACCCCGGC TACGCCCAGT GGGAGGCCGA GCTTGACCGC ATGGAGGCCG CAGGCATACG CGGCATCAAG CTACATCCGG ACTTCCAGGG CTTCTGGCTC AGCGACCCGC GCCTTTTGCC TATCTTTGAG GCTGCGCAAG GACGCTTTAT TTTTGAAATG CACATTGGGG ACAAAATTTC TCCAGAAAAA AACCCCTCCT GCCCTTACAA GCTGGCTGCC ATTCTGGACG CCTTTCCACG CCTTCAGGTC ATAGCCGCGC ACTTTGGCGG CTACCGCATG TGGGCGCATG CGCTCAAGGC TTTCGCCGGC AAGAAGCGCC CCAACCTGTG GTTTGACAGC TCAAGCACCA CGCCGTTTGC CACACCCATG CTTGTAAAAA CCTTGCTGGC CGCCTACCCC GCTGACAGGA TACTTTTCGG CACGGACTGG CCGCTGTATG ATCCCCTGGA TGAAAAACAC AGGCTTCAGG AAAAAGGCGG CCTGAGCGAC AGCATGCTGG AACGGCTCAT GAGCAACGCC GCAACCATAC CGGGCCTGCT GCCCCCGCAA ACCGGACAGG CGGAACAAGC CATCAGGCAT TGA
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Protein sequence | MHIDIHTHAF HPKIAHKAVE HLNGHYAVAC AGNGTITNLL ENERRAGIDM CVVLCAATAP AQVIPANNYA ISLQRAHPDS VIAFGTIHPG YAQWEAELDR MEAAGIRGIK LHPDFQGFWL SDPRLLPIFE AAQGRFIFEM HIGDKISPEK NPSCPYKLAA ILDAFPRLQV IAAHFGGYRM WAHALKAFAG KKRPNLWFDS SSTTPFATPM LVKTLLAAYP ADRILFGTDW PLYDPLDEKH RLQEKGGLSD SMLERLMSNA ATIPGLLPPQ TGQAEQAIRH
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