Gene Ddes_0786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0786 
Symbol 
ID7284460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp920381 
End bp921463 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content59% 
IMG OID643581582 
Productglycine cleavage system T protein 
Protein accessionYP_002479372 
Protein GI220904060 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0404] Glycine cleavage system T protein (aminomethyltransferase) 
TIGRFAM ID[TIGR00528] glycine cleavage system T protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGACT TGCGTACCCC GCTGACCTCC TGGCATGAAG CCCAGGGAGC GAAAATGGCC 
CCCTTTGCGG GCTGGCTCAT GCCCATTCAG TACGAGGGCA TTCTTGCGGA ACATCTCCAC
ACCCGGAAAC ATGCCGGTAT TTTTGACATC TGCCATATGG GAGAATTTCG CATTGAAGGC
CCTGGCGCTA CAGAGGCCCT GTCGCGCGCC GTAAGCCACA ATCTTGAAAC CCTGGCCCCC
GGCAAGTGCC GTTATGGTTT TCTGCTCACG GAAAAAGGCG GCGTTCTTGA CGACGGCATC
ATCTACCGTT TCGGGCCTGA TTCCTTCATG GCCGTGGTCA ATGCCGCCTG CGCCCCCGGC
GATCTGGCAA CCCTGCGCGC CCGCCTGCCT GAAAGTATCA GGATTACCGA CATCTCGGCC
GAAACCGGCA AGGTTGACCT GCAAGGCCCG GATTCACTGG ACGTGCTTGA AAAGATCATG
GGCGAAAATT TTCATGACCT CGGCTACTTT TCTTTTCGCG AAAGCAAGTG GCAGGGTGTG
CCTGTGCTTG TGAGCCGTAC CGGTTACACT GGTGAACTTG GGTATGAGCT TTATCTGCCC
ACGGACAAAA CCGAGGCTTT CTGGAAAGCC CTGCTGGCCG ATGAGCGTGT TAAACCTGTC
GGCCTTGGCG CTCGCGACAC GCTGCGCCTT GAGGCCGGTT TGCCGCTTTA CGGGCATGAC
CTTGATGAAG AACATACGCC CGCCGAGGCG GGTATGGCCC GCATGATGAC AAGCCAGGCC
GACTATGTGG GCAGGGAAGG GGCACAGACC GTGCGCGAAG TGCTTGTACC CCTGCAGATC
GAAGGCCGCC GCGCCGCCCG CCACGGCGAT GTGCTGGCGC TGCCCGGCGG CGAGGCCGTA
GGGCGCATCA CCAGCGGCTC GTTTGCGCCC TCTTTGGGCT ATGTTATTGC TTTTGCCTGG
GTGGCTGCCG CCCATGCGGA CAAGGAAGAT TTTGTGGTGC GCGCCTCCAG AACGGAACTG
CCCGCCAAAA AGGTGGAAAT TCCCTTCTAC AAAGAAGGCA CGGCCCGCAA AAAGCTGGTC
TGA
 
Protein sequence
MSDLRTPLTS WHEAQGAKMA PFAGWLMPIQ YEGILAEHLH TRKHAGIFDI CHMGEFRIEG 
PGATEALSRA VSHNLETLAP GKCRYGFLLT EKGGVLDDGI IYRFGPDSFM AVVNAACAPG
DLATLRARLP ESIRITDISA ETGKVDLQGP DSLDVLEKIM GENFHDLGYF SFRESKWQGV
PVLVSRTGYT GELGYELYLP TDKTEAFWKA LLADERVKPV GLGARDTLRL EAGLPLYGHD
LDEEHTPAEA GMARMMTSQA DYVGREGAQT VREVLVPLQI EGRRAARHGD VLALPGGEAV
GRITSGSFAP SLGYVIAFAW VAAAHADKED FVVRASRTEL PAKKVEIPFY KEGTARKKLV