Gene Ddes_0540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0540 
Symbol 
ID7284208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp651533 
End bp652624 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content61% 
IMG OID643581333 
ProductdTDP-glucose 4,6-dehydratase 
Protein accessionYP_002479129 
Protein GI220903817 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1088] dTDP-D-glucose 4,6-dehydratase 
TIGRFAM ID[TIGR01181] dTDP-glucose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTGCC AACTTGTCAC AGGGGGCGCG GGCTTCATCG GCTCGGCCTA TGTGCTTCAG 
GCGCGCCGCG CCGGCATCCG CGTCATCAAT CTCGACAAGC TGACCTATGC GGGCAATCCG 
GCCAATCTGG CTTCACTGAC CGGCGACCCG GAGCATGTTT TCGTGCGCGG CGATATCGGC 
AATGAGGAGC TGGTAGCCTT TCTGCTCGAG ACGCATCAGC CCGATGCCGT GGTCAATTTT 
GCCGCAGAAA GCCATGTGGA CCGCTCTATT GTGGCCCCGG ACGCTTTTGC CCGTACCAAC 
GTGCTCGGCA CGGCAACCCT GCTGCGTGTG GTCAAGGACT GGTGGAGCGG GCTTTCTTTT 
AAGCAGGCTG CGGATTTTCG TTTTCTGCAT GTGTCCACAG ATGAGGTGTA CGGCGCTCTA 
CAGCCCGGCG ACCCGGCTTT TTCAGAGAGC ACGCCATACA GTCCCAACAG CCCGTATTCG 
GCGTCCAAGG CGGCCAGTGA CCATATGGTG CGCGCCTTTC ACGAAACCTA CGGCCTACCC 
ATCCTGCTGA CCAACTGTTC CAATAATTAC GGGCCGCGTC AGTTTCCGGA AAAACTCATT 
CCTCTCATGA TTCTTACCGC ACTTGAGCGC AAACCCTTGC CCGTGTACGG GCAGGGGGCC 
AATATCCGCG ACTGGCTGCA TGTGGACGAC CACTGCACAG CCATCGCCCG GGTGCTTGAG 
GCCGGGCAGG TAGGGCGCAC CTACAATGTC GGCGGTCATG CGGAGCGGAC CAACCTTGAG 
GTGGTGCATG CCGTGTGCGC CATTCTTGAT GACGTGCGCC CTTCCGCCCG GGGGCCGTAT 
GCCGATCTCA TCACCTTTGT TTCCGACAGG CCCGGGCATG ACTTCCGTTA TGCCATCGAC 
TGCTCGCGCA TTGAAAGCGA ACTGGGCTGG CGGCCTTCGC GCCGGTTTGA CACGGGGTTG 
CGCGATACCG TGCGCTGGTA TCTGGAAAAC AGCGCCTGGG TAGATCTTGT GCGCAGCGGG 
GCCTATCTTG AGTGGATGGA TATCAACTAC GGGCGGCGTA CCATTGCAGG CGGCGGGGGG 
GAAAGCCTAT GA
 
Protein sequence
MTCQLVTGGA GFIGSAYVLQ ARRAGIRVIN LDKLTYAGNP ANLASLTGDP EHVFVRGDIG 
NEELVAFLLE THQPDAVVNF AAESHVDRSI VAPDAFARTN VLGTATLLRV VKDWWSGLSF 
KQAADFRFLH VSTDEVYGAL QPGDPAFSES TPYSPNSPYS ASKAASDHMV RAFHETYGLP 
ILLTNCSNNY GPRQFPEKLI PLMILTALER KPLPVYGQGA NIRDWLHVDD HCTAIARVLE 
AGQVGRTYNV GGHAERTNLE VVHAVCAILD DVRPSARGPY ADLITFVSDR PGHDFRYAID 
CSRIESELGW RPSRRFDTGL RDTVRWYLEN SAWVDLVRSG AYLEWMDINY GRRTIAGGGG 
ESL