| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_0158 |
|---|
| Symbol | |
|---|
| ID | 7283812 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | - |
|---|
| Start bp | 197234 |
|---|
| End bp | 197788 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643580946 |
|---|
| Product | putative phytochrome sensor protein |
|---|
| Protein accession | YP_002478756 |
|---|
| Protein GI | 220903444 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3605] Signal transduction protein containing GAF and PtsI domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACAAG ATTATTTCCG CGCACTCAGA GATGTGGCGC TGGTCATCAA CTCCAGCCTT
GAACCCAAGG ACGTCCTGCA CAAAATCACG GAACAGACCG CGTCCACCAT GGGCTGCAAG
GCCAGCACCA TCCGCCTGCT GGACACCACG GGCCGCTTTC TGCTGCCCAG CGCCGCCCAC
GGCCTTTCAG CCACCTACCT GCGCAAAGGC CCGGTAGAAG TAAAACGCAG CGGCATGGAC
GGTGAAGTCC TGGCCGGCAA AACCATCCAC CTCAAGGATG CCGCCGCCGA CGGCCGCTTT
CAGTATCCTG AATCAGCCAA GACCGAAGGA CTGGTTTCCG TTCTTTCGGC TCCCCTCATG
GTGGACGGCA AGGCCATCGG CCTCATTCGC GTGTATTCCG CCGAAGAACG CGAATTTACG
CCCGACGAAC AGACCTTTAT GGAAGCCGTG GCCGCCATTT CTGCGCTTGC CATTGAAAAC
GCCCGCCTGC ATGAGGCGCT GCGCAACAAT TACGAACTGA TGAGCAAGCA CGCCTACTCG
GTATACGAAG ACTAG
|
|---|
| Protein sequence | MAQDYFRALR DVALVINSSL EPKDVLHKIT EQTASTMGCK ASTIRLLDTT GRFLLPSAAH
GLSATYLRKG PVEVKRSGMD GEVLAGKTIH LKDAAADGRF QYPESAKTEG LVSVLSAPLM
VDGKAIGLIR VYSAEEREFT PDEQTFMEAV AAISALAIEN ARLHEALRNN YELMSKHAYS
VYED
|
|---|
| |