Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_3415 |
Symbol | |
ID | 3758392 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 3376112 |
End bp | 3377995 |
Gene Length | 1884 bp |
Protein Length | 627 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637784327 |
Product | FtsH-2 peptidase |
Protein accession | YP_389903 |
Protein GI | 78358454 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAAAGA AAGATCAATG GAACATTGGC TACTGGATCG TCGCCGGCCT GTTGCTGCTG ACGCTGCAGA ACTACTGGCA GGCGGCCAAG ACTGTCGAGC CCGTGCCCTA CAGCGAATTC GAGAAGGCGC TGGCCGAGGG GCGCGTCGCC GAAGTGTTGG TGTCGGACCG CACGGTCACC GGGCGCCTGA AATCGCCGGA CAGCCGGGGC AAGACCACCA TCGTGGCCAC CCGTGTCGAA CCCGACCTGG CCGAGCGGCT GTCCAAGTAC GACGTGCCCT ATGCGCGGGT GGTGGAAAGT ACCTGGCTGC GTGATGTGCT CTCCTGGATT CTGCCGGCGG TGGCCTTCTT CGGCGTCTGG TTCTTCCTGT TCCGCCGCTT CGCCGAGAAG CAGGGTATGG GTGGCTTCCT GAGCATCGGC AAGAGCCGTG CCAAGGTATT CATGGAGAAG AACACTGGCG TGACCTTTGC CGATGTCGCT GGCGTCGATG AAGCCAAGGC GGATTTGGTT GAGATCGTCG ATTTCCTCAA GAATCCGCAG GAGTATGGAC GGCTCGGGGC GCGCATTCCC AAGGGCGTGT TGCTGGCCGG CCCACCGGGC ACCGGCAAGA CATTGCTGGC CAAGGCTGTT GCCGGCGAGG CGGCGGTGCC CTTCTTCTCC ATCTCCGGAT CAGAGTTTGT CGAGATGTTC GTCGGCGTGG GTGCGGCCCG TGTGCGCGAC CTGTTCGAAC AGGCGCGTGT GCAGGCGCCG GCGATCATCT TCATCGATGA GCTGGATGCT TTGGGCCGCG CACGCGGTGT CGGAGGACCG ATCGGTGGAC ACGACGAGCG TGAGCAGACG CTGAACCAGT TGCTCACCGA AATGGATGGC TTCGACAGCT CGGTCGGGCT GATCATCCTT GCAGCCACCA ACCGGCCGGA GATCCTCGAT CAGGCCTTGC TTCGCGCCGG TCGCTTCGAC CGTCAGGTGC TGGTGGACCG TCCCGACAAG AAAGGTCGCC TGGATATCCT GAAGGTCCAT GTCAAGAAGA TCACCCTGGC CCACGGTGTA GATCTGGAAC AGGTTGCGGC GCTGACCACC GGCTTTTCCG GCGCTGATCT GGCCAATCTC GTGAACGAAG CAGCGCTGAA CGCGACGCGG CGCAAGGCGC AGGCTGTGGA ACTGCAAGAC TTCACCGCCG CCATCGAGCG CATCGTGGCC GGCCTGGAAA GGAAGAACCG TGTGCTCAAT CCGAAGGAGC GGGAAACCGT GGCCTATCAC GAGATGGGGC ATGCGCTGGT GGCGCTGGCG CTGCCCGGCA CCGATCCGGT ACACAAGATT TCAATCGTTC CGCGTGGCAT CGGTGCACTC GGCTACACCC TGCAGCGGCC CACCGAAGAC CGATTTCTGA TGACACGTGC CGACCTGGAG CACAAGATTG CCGTGCTCCT GGGAGGGCGC GCGGCTGAGA AGCTCGTGTT CGGCGAGCTG TCCACAGGGG CTTCAGACGA TCTCGCGCGG GCCACCGATA TCGCCCGCGA CATGATTACG CGCTTCGGCA TGGATGAGGG CTTGGGGTAC GTTGCTTTTG AGGCACAGAG GCCGCGTTTT CTTGATGCGC CTGAACTGGT ACAGGGTGGC TGCCGGGTAG CCGAATCGAC TCAGACACGC ATCGACCAAG CCATCCGTGA CATCGTGATG GGTGTGTTTG ATCGTGCATA CCGAATTCTC GAAATTAACC GAGAAGTGCT GGAGCGGTGC GCGCGCGAAC TGCTCGCACG GGAAACGCTG GATGAATACA GCATCCGGCA ACTGACGCAA GGGCTACAGC TCGAATCCCC ATGTCACAGC GGCCCAACTG CCGGAGCCAT TACTTCCTCT GTGTCCAAAG GAGCCGCCTC ATGA
|
Protein sequence | MEKKDQWNIG YWIVAGLLLL TLQNYWQAAK TVEPVPYSEF EKALAEGRVA EVLVSDRTVT GRLKSPDSRG KTTIVATRVE PDLAERLSKY DVPYARVVES TWLRDVLSWI LPAVAFFGVW FFLFRRFAEK QGMGGFLSIG KSRAKVFMEK NTGVTFADVA GVDEAKADLV EIVDFLKNPQ EYGRLGARIP KGVLLAGPPG TGKTLLAKAV AGEAAVPFFS ISGSEFVEMF VGVGAARVRD LFEQARVQAP AIIFIDELDA LGRARGVGGP IGGHDEREQT LNQLLTEMDG FDSSVGLIIL AATNRPEILD QALLRAGRFD RQVLVDRPDK KGRLDILKVH VKKITLAHGV DLEQVAALTT GFSGADLANL VNEAALNATR RKAQAVELQD FTAAIERIVA GLERKNRVLN PKERETVAYH EMGHALVALA LPGTDPVHKI SIVPRGIGAL GYTLQRPTED RFLMTRADLE HKIAVLLGGR AAEKLVFGEL STGASDDLAR ATDIARDMIT RFGMDEGLGY VAFEAQRPRF LDAPELVQGG CRVAESTQTR IDQAIRDIVM GVFDRAYRIL EINREVLERC ARELLARETL DEYSIRQLTQ GLQLESPCHS GPTAGAITSS VSKGAAS
|
| |