| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_3048 |
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| Symbol | |
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| ID | 3758041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 3038829 |
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| End bp | 3040025 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637783957 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_389537 |
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| Protein GI | 78358088 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.795755 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCCGTCA CCGGAAATTC AGTACTTTTT GCCAGAGAAT ATGAGCTGAT AGCCGAAGCG
GAAGCTGCAT TGGCCCGTAT GGCACCGGAG GCTCCGGCGC ATGATGCGCT GGCAGGTCTG
CTTGCGGGGT TCTGCAAAAC GCTGCGGCAA TGCGGCCGGC TTATGTCCAT GGGGGACAGA
ATGCAGGCGC AGCTGAGTGA ACTGAACCGC GATATCGCGG CCAAAGAAGC GCGCTACCGC
TCCATTTTTC AGTGCGCGGC CGAAGGGGTT TTCCGTACCG GTGCAGACGG CAGCTTTGCG
GAAGTCAATC CTGCCATGGC AAACATTTTC GGCTGGTCTT CGGTGGATGC GTTCATGCAG
CACAACACCA GCCTTGCTTC TTTGTTTTCA TCGCCGCAGG CGCACTGCGA ATATCTGGAC
AGGCTGTGCA GCGCCGGAGC TGTTTCACGT TACGAAGCTG TTCTGCGACG CAGAGACGGC
ACGCCCGTAT GGGTCGAAAT CAGCACGCAG GCGCTGGAAA CAGCTCCGGA GACGGCCTGC
GGCGCCACGC ATGTGGGCGT GGTGCTTGAT GTGACCGCCC ACAGGCGCAT GCTTGAAGAG
CTGTCACACA TGGCCCGTAC CGATCCGCTG ACCGGTCTTA ACAACCGCCG TTTTTTTATG
GAGGCAGCCC GTGCCGAAGT GGAGCGCATG CAAAGCAGCG GCAGGCCGCT CTCTTTGCTG
ATGCTCGACA TAGACCACTT TAAACGGGTC AACGACACGT GGGGGCACGA TGCCGGTGAC
ATGGTGCTCA AACAGCTTTC CTGCTGCCTT GCAGAGACCA TGCGCGGACA GGATGTCTGC
GCGCGGCTGG GCGGAGAAGA GTTTGCCGTG CTGCTGCCGG AAACAGGCCA CGCCGAGGCC
TGCCGTGCCG CGGAAACACT GCGTCAGGCT GTGGCCGGCA TGGCGTTTGC CGGGCATGGT
TTTTCCGTCA CGTCGTCGCT GGGCCTTACC ACACTGGATT CCGCGGGGCA TGCCGTTTCG
GGGCAGCGTC CTGTGCCGGG GGGCGTTGCG GTCTCTGCCT GCTGCGGGCA GGTGGTGGAA
ATCCTGCTGA AGCGGGCCGA CATTGCCCTG TATGCGGCAA AAAAGAACGG CCGCAACCGT
ACGGAAGTAT ATCCTGCCCG TTGCACTGCC ATATGCGCCG GGGCGTTATG CATCTGA
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| Protein sequence | MSVTGNSVLF AREYELIAEA EAALARMAPE APAHDALAGL LAGFCKTLRQ CGRLMSMGDR
MQAQLSELNR DIAAKEARYR SIFQCAAEGV FRTGADGSFA EVNPAMANIF GWSSVDAFMQ
HNTSLASLFS SPQAHCEYLD RLCSAGAVSR YEAVLRRRDG TPVWVEISTQ ALETAPETAC
GATHVGVVLD VTAHRRMLEE LSHMARTDPL TGLNNRRFFM EAARAEVERM QSSGRPLSLL
MLDIDHFKRV NDTWGHDAGD MVLKQLSCCL AETMRGQDVC ARLGGEEFAV LLPETGHAEA
CRAAETLRQA VAGMAFAGHG FSVTSSLGLT TLDSAGHAVS GQRPVPGGVA VSACCGQVVE
ILLKRADIAL YAAKKNGRNR TEVYPARCTA ICAGALCI
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