Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_2477 |
Symbol | |
ID | 3757493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 2496722 |
End bp | 2498659 |
Gene Length | 1938 bp |
Protein Length | 645 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637783373 |
Product | ATPase |
Protein accession | YP_388969 |
Protein GI | 78357520 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.367976 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCTTA TCAGCGTACG CGATGTTTCA TTGAATCTTT ACGGCCCGCA ACTGCTCGAT CAGGTGACTG TGCAGATAGA GCAGGGCGAA CGGGTTTGTC TTATGGGGCG CAACGGACAG GGCAAGTCCA CCTTTCTCAA GCTGCTTGCC GGTGTGATGC AGCCTGACTC GGGGCAGATC GTGCGCGGAC AGGGGGTGCG TACGGCCTTT CTGGCACAGG ACGTGCCGCA GGATATCACA GGCGATGTCT ATTCCGTGGT ATGCGGGGGG CTGGGCGAAG AAGGCAGGGC GCTGGCCGCA TTTCACGGGG CCATGCGCCA GACCGGAACC GCGGACGACG ACGGCATGGT TTCTGCCGCT CAGGCCGCGG TGGATGCTGC CTCCGGCTGG GAGCGGCATG GCGACATCAT GAGCGCGCTC AACCATCTTC AGCTTGATCC GTATGCCGAT TTTTCGTGTC TTTCTGGCGG GATGAAACGC CGTGCCATGC TGGCACGCGC ACTGGTCAGC GATCCGGACC TGCTGCTGCT GGACGAACCC ACAAACCATC TGGACATCAG TTCCATAGCA TGGCTTGAAG ATTTTCTGCT GCGCAGGGCC AGAGCGCTTG TGTTTGTGAC ACACGACAGA GCCTTTCTGC GCAGGGTGGC AAAACGCATC ATCGAGCTGG ACAGGGGCCG CATGGCCGAC TGGAGCTGTG ATTATGACAC CTTTCTGGAG CGCAAACAGG CCCAGCTGGA AATAGAGGAA AAGGAATGGG CCAACTTTGA TAAAAAGCTG GCGCAGGAAG AAGTGTGGAT CCGGCAGGGC ATAAAGGCCC GGCGTACCAG AAACATGGGG CGTGTACGCG CACTGCAGGC CATGCGGGAC GAGAGGAGAA AGCGCCGCGA GCGGCAGGGC ACCGTGACCA TGCAGATGCA GGAGGCTGAA CGCAGCGGCA AGCTGGTTAT CGAGGCTGAC GGTATATCCT ACACCTGGCC CGACGCTCCG GCAGGCACGG CGCCGGTCAT CCGCGATGCC TCGGTGCTGG TTACCAGAGG CGACAAAGTG GGCATCATCG GCCCCAACGG AGCGGGTAAG ACAACGCTGC TGCGGCTGCT GCTGGGCGAT CTGAAGCCGG ACTGCGGCAG CATCCGGCAC GGCACCAGAC TGGAAATCGC CTATTTTGAC CAGCTGCGCA ATGTTCTGGA TGATGAGGCC AGCGTACGCG AAAGCGTGGC AGGCGGTAAC GACACCCTGG AGATCAACGG CGTGCGCAAG CACGTTGTGG GGTATCTGAA AGAATTTCTT TTTGAACCGG AGCGGACCAT GCTGCCGGTA AAAGTGCTTT CGGGTGGCGA GCGCAACAGG TTGCTGCTGG CCAGATTGTT TGCGCGTCCT TCCAACCTGC TGGTGATGGA CGAACCCACC AACGATCTGG ACATGGAAAC GCTGGAGCTG CTGGAGGAAC TGCTGGGTGA ATATTCGGGT ACCGTGCTCA TTGTCAGCCA CGACAGAGCT TTTCTGAACA ATGTGGTGAC CTCTACGCTG GCATTCGAGG GCGGCGGGTG CGTGAATGAA TATGTGGGCG GCTACGATGA CTGGCTGCGC CAGCGCCCGC AGCCGGTGCA GGAAGAAAAG CCTGCAGCCT CCCGGCAGTC CAGAACGGAG CGGCAGCAGG AAAAACCGCG CAAGCTGACG TTTAATGAAC AGCGCGAACT GAAACAGCTG GAAGAAGAAC TGCAGGAACT GCCGCTCCGC ATGGAAGCGC TGGAAAAAGA GCAGGCGGCG GCGGAAGCCG AACTGTCAGA CCCTGCATTG TATACCGGCA ATCCAGAGCG CTTTGCCGTG CTTTCCGCAA GGCTGCCCGC CATTGAAGAA GAACTCATGG AACTGCTGAC CCGCTGGGAA GAGACGGAAC AGCGTGCCGC CGACCTGCGC GGCATGCCCG GTCAGTAA
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Protein sequence | MALISVRDVS LNLYGPQLLD QVTVQIEQGE RVCLMGRNGQ GKSTFLKLLA GVMQPDSGQI VRGQGVRTAF LAQDVPQDIT GDVYSVVCGG LGEEGRALAA FHGAMRQTGT ADDDGMVSAA QAAVDAASGW ERHGDIMSAL NHLQLDPYAD FSCLSGGMKR RAMLARALVS DPDLLLLDEP TNHLDISSIA WLEDFLLRRA RALVFVTHDR AFLRRVAKRI IELDRGRMAD WSCDYDTFLE RKQAQLEIEE KEWANFDKKL AQEEVWIRQG IKARRTRNMG RVRALQAMRD ERRKRRERQG TVTMQMQEAE RSGKLVIEAD GISYTWPDAP AGTAPVIRDA SVLVTRGDKV GIIGPNGAGK TTLLRLLLGD LKPDCGSIRH GTRLEIAYFD QLRNVLDDEA SVRESVAGGN DTLEINGVRK HVVGYLKEFL FEPERTMLPV KVLSGGERNR LLLARLFARP SNLLVMDEPT NDLDMETLEL LEELLGEYSG TVLIVSHDRA FLNNVVTSTL AFEGGGCVNE YVGGYDDWLR QRPQPVQEEK PAASRQSRTE RQQEKPRKLT FNEQRELKQL EEELQELPLR MEALEKEQAA AEAELSDPAL YTGNPERFAV LSARLPAIEE ELMELLTRWE ETEQRAADLR GMPGQ
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