| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2285 |
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| Symbol | |
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| ID | 3757296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 2307165 |
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| End bp | 2309081 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637783176 |
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| Product | glycogen branching enzyme |
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| Protein accession | YP_388777 |
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| Protein GI | 78357328 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCAACAC CTGTCGAGTC CGGAACCGTG CCGTGCAGTC TGGAACCGTT TGACGTGTAT
CTTTTCGGTC GCGGAGAGCA TTGGGATATA TACAGAGTGC TGGGCGCGCA TGCCCATGCT
CAGGACGGTG AAACCGGATA CCGGTTTGCG GTATGGGCGC CCAATGCGCA TGCGGTAAGT
CTGGTTGGGC CGTTCAATGA CTGGCGTTCC GGCGATTTTC CTTTGTTTCC TGTCGGAACA
TCCGGCATCT GGGCCGGATT TGTCGCCGGC ATGGAATACG GGCGGCTGTA CAAGTTTGCC
GTACAGGGTG CCGACGGCAC TGTGCGTTTG AAAACAGACC CCTATGCCTT GTATTGCGAA
ATGCGGCCCG GCACGGCGTC ATTTACTTGG TCGCTTGACA GCTATGCGTG GAACGACGCT
GCATGGATGC AGCGTAGACG TGAAGCCGGT CCGCCTTTGC AGCAGCCGGT CAGCATATAT
GAACTCCATG CCGGTTCGTG GATGCGCCGC CATGGTGAAG GGCATCCTTT TGTAAACTGG
GATGAACTGG CCGGCACACT GATACCCTAT GTCCGCGACG CAGGCTTTAC TCATATCGAG
CTTATGCCCG TGGCTGAGCA TCCGCTGGAT CAGTCGTGGG GATACCAGAC CGGCGCCTAC
TATGCGCCCA CTTCGCGCTT TGGAACGCCC GATGATTTGA GACGGTTTGT AGACCTTTGC
CACCAGCAGG GCATAGGGGT GATTCTGGAC TGGGTACCCG CGCATTTTCC CAAGGATGAC
TGGAGTCTGG GGCGGTTTGA CGGCACAGCC CTGTACGAGC ATCTGGACCC GCGTCTCGGC
GAGCATCCGG ACTGGGGTAC CTATGTGTTC AATTACGGAC GGCATGAGGT GCGCAACTTT
CTGTTTGCCA ACGCGCTCTA CTGGTTCAAG GAATTTCATG TGGACGGTTT GCGCATAGAT
GCAGTGGCAT CCATGCTGTA TCTTGACTAT TCCCGCAAGG AAGGGGAGTG GCTGCCCAAT
GTGCACGGCG GCAATGAAAA TCTGGAAGCC ATTGATTTTC TGCGCGAACT GAACAGAGTG
GTGCACGAGC AGTACCCCGG TGTGATGATG ATAGCGGAAG AATCCACCTC ATGGCCGGGG
GTGTCGCGGC CGTTGTACAC GGGGGGGCTG GGGTTCACGT TTAAATGGAA CATGGGCTGG
ATGCACGATA CGCTGAATTA TATGCGGCAG GACCCTGTGT TCAGGGCATA CCAGCACAGC
AGCCTGACAT TTTCCATGCT GTATGCTTTT TCCGAAAACT TTGTCCTGCC GCTTTCGCAT
GATGAAGTTG TGCACGGCAA AGGGGCGCTG CTTTCTAAAA TGCCCGGCGA CATGTGGCAG
CAGCAGGCCA ATTTGCGGTT GATGTACGCA TACATGTGGG CGCATCCGGG TAAAAAACTG
CTGTTTATGG GCGGTGAGAT AGGTCAGTGG AACGAGTGGA GCGAAAGCCG TGAACCGGAC
TGGTGCCTGC GTGAATTTCC TGCCCACGAA GGCATACGCA ATCTGGTGCG CGACCTTAAC
GGCATATATG CACAGGAACC GGCCATGCAC CGCCACGACC ACGACTGGTC GGGGTTCCGC
TGGCTCGATT TCAGCGATTA CGGATGTTCC GTCATCAGTT TTGCCCGTTT TGCGGAAGAT
AGTCCGCCTG TGATGTGGGT GTTCAATTTT ACGCCGGTAG TCCGTCGCTG GTACCGTGTT
CCATGCCCCA GAGCCGGAGA ATGGCAGGAA GTGCTGAATA CGGACAGCGG TTACTACGGC
GGCAGCAACG TGGGCAACGG GGGCGGTGCG GTAGCCTGCA CCGACAACTG GCACGGCGGG
CATTTTATGG AGCTGACTCT GCCTCCGCTG GCGGCCGTGG CGTTAAAACC TGTGTGA
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| Protein sequence | MATPVESGTV PCSLEPFDVY LFGRGEHWDI YRVLGAHAHA QDGETGYRFA VWAPNAHAVS
LVGPFNDWRS GDFPLFPVGT SGIWAGFVAG MEYGRLYKFA VQGADGTVRL KTDPYALYCE
MRPGTASFTW SLDSYAWNDA AWMQRRREAG PPLQQPVSIY ELHAGSWMRR HGEGHPFVNW
DELAGTLIPY VRDAGFTHIE LMPVAEHPLD QSWGYQTGAY YAPTSRFGTP DDLRRFVDLC
HQQGIGVILD WVPAHFPKDD WSLGRFDGTA LYEHLDPRLG EHPDWGTYVF NYGRHEVRNF
LFANALYWFK EFHVDGLRID AVASMLYLDY SRKEGEWLPN VHGGNENLEA IDFLRELNRV
VHEQYPGVMM IAEESTSWPG VSRPLYTGGL GFTFKWNMGW MHDTLNYMRQ DPVFRAYQHS
SLTFSMLYAF SENFVLPLSH DEVVHGKGAL LSKMPGDMWQ QQANLRLMYA YMWAHPGKKL
LFMGGEIGQW NEWSESREPD WCLREFPAHE GIRNLVRDLN GIYAQEPAMH RHDHDWSGFR
WLDFSDYGCS VISFARFAED SPPVMWVFNF TPVVRRWYRV PCPRAGEWQE VLNTDSGYYG
GSNVGNGGGA VACTDNWHGG HFMELTLPPL AAVALKPV
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