Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_2257 |
Symbol | rplC |
ID | 3757268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 2281917 |
End bp | 2282546 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637783148 |
Product | 50S ribosomal protein L3 |
Protein accession | YP_388749 |
Protein GI | 78357300 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0087] Ribosomal protein L3 |
TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00000117498 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGAGA AGATGGGAAT CCTGGGTCGC AAGATCGGCA TGACCCGCAT TTTCGCCAAT GATGGCAGTG CGGTGGCTGT GACCGTGATT CAAGCTGGTC CCTGTCCTGT AATTCAGGTC AAGGATGCGG CCAAGGATGG ATATAACGCC GTTCAGATCG GTTTTGAAGA GGCCAAAGAA AAGCACGTAA ACAAGCCCGC CCGTGGTCAC ATGGACAAGG CTGGTCGCGG TTTGTTCCGC GTGCTGCGCG AGATTCGTCT CGAAGCTCCT GCTGAGCAAA AAGTCGGCGA CGACTTGACC GTGGGTCTTT TTACCCCCGG CGAATTTGTG AAGGTGACCG GCACCAGCAT TGGTAAAGGT TTCGCCGGCG TGATGAAGCG CTGGAACTTC GGCGGTATGC CTGCAAGCCA CGGTCACGAG GCTGTGCACC GCTCGCCCGG TTCCATCGGT CACGCCACCT TCCCCGGCAA GGTTTGGAAG AACAAGAAGA TGGCCGGCCA TATGGGTGCC CGTCAGGTTA CTGTAAAGAG CCTGCAGATC ATCGAAGTCC GCGCGGAAGA CAACCTGATC CTGGTCAAAG GCCCCGTGCC CGGTCCCAAG AACGGCCTGG TCATGGTCCG CAAGCAGTAA
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Protein sequence | MAEKMGILGR KIGMTRIFAN DGSAVAVTVI QAGPCPVIQV KDAAKDGYNA VQIGFEEAKE KHVNKPARGH MDKAGRGLFR VLREIRLEAP AEQKVGDDLT VGLFTPGEFV KVTGTSIGKG FAGVMKRWNF GGMPASHGHE AVHRSPGSIG HATFPGKVWK NKKMAGHMGA RQVTVKSLQI IEVRAEDNLI LVKGPVPGPK NGLVMVRKQ
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