Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_1997 |
Symbol | |
ID | 3757004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 2040355 |
End bp | 2041071 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637782884 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_388489 |
Protein GI | 78357040 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.650979 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAACGT TTTTTCTTTC ACCGGACGAA TGGGACAGAC AGTGCACTCT TAGAGGCTCC GAAGCACACC ATATGATAAA GGTGCTGCGG ATGCGTGCAG GAGACACCTG CCGGATTCTG GACGGCAAAG GCCGTGAAGG CTTATTCATA ATACGCGGTA TGGATAAAAA CAGTGTGCAG CTGGAGCTTG CAGAAACTGT CATGCACCCC GAACCGCATT CGCGCGCGTA TATTGCCCTG GGCTGGGGCA AATCAGTAAG GCGCAGCTGG ATTTTTGAAA AGGCAGTGGA GCTGGAAGCT GCGGGGATCT GGCTGTGGCA GGCGGCACGC AGCCAGTCAA AAATGCCTGA CATGACAAAA GAAAGCTGGC ACAGCCAGCT TGTTGCAGGT GCAAAGCAAT GCGTCAACCC ATGGATTCCC GAACTGAAAT CGGTGGCCGC TGGGGTGACC GGACTGGTCG AACTGGCTCA GGGCTTTGAC CGTAAATTCA TTCTGTGGGA AGGAGAAGCC AGAGAAGCGT TGCTGTCTGG CGAAACCCTC GGCACTTCAG GTGACACTCT GTTTGTAATA GGCCCCGAAG GCGGCTTCGC AGATGACGAG GTCAGCCTGC TGAAAGAAAG CGGCTTTGCA GCCGCCAGTC TGGGCAACAG AATACTGCGC TGGGAAACGG CGGCACTTCT TTGCCTTGGG CTGCACTTCT GGAGCAAACA ACGATAA
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Protein sequence | MRTFFLSPDE WDRQCTLRGS EAHHMIKVLR MRAGDTCRIL DGKGREGLFI IRGMDKNSVQ LELAETVMHP EPHSRAYIAL GWGKSVRRSW IFEKAVELEA AGIWLWQAAR SQSKMPDMTK ESWHSQLVAG AKQCVNPWIP ELKSVAAGVT GLVELAQGFD RKFILWEGEA REALLSGETL GTSGDTLFVI GPEGGFADDE VSLLKESGFA AASLGNRILR WETAALLCLG LHFWSKQR
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