Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_1810 |
Symbol | |
ID | 3756813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 1860007 |
End bp | 1861239 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637782694 |
Product | diaminopimelate aminotransferase |
Protein accession | YP_388302 |
Protein GI | 78356853 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | [TIGR01910] acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.803619 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTACAGA CTCTTTTTGC CTATCTCGAC ACCCAGCGCG ACACCGTGGT GGAACTGCAG CGCGAGCTGA CCGCCATTCC TGCGCTGGAT CCTCAAAGTG AAGGAATCGG CGAAGAAGCC AAGGCTGAAT ATATCATCGC CAGACTGCGG GAATTCGGGG TGACGGATAT TGAAACCGTC AATGCTCCGG ATATCCGTGT TCCGTGCGGA TATCGTCCCA ACGTCATCGC CCGCATCGCC GGACGCGATA CCTCCAGAAC TTTCTGGATC ATTTCGCACA TGGATGTGGT CCCTCCCGGA GATCTGGATC TGTGGGATGC CGACCCCTAT ACCTTGCGTA CCGAGGGTGA TGTCCTTATA GGGCGGGGTG TGGAAGATAA CCAGCAGGCC ATTGTTTCCA GCCTGCTGAT GGCCCGGGCA TTGTGTCGTC ATGATATCAC GCCGGAAATA AACATTGGCC TTCTGTTTGT GGCGGACGAG GAAACAGGGA ACACGTTCGG GCTTGACCAT GTGCTGGCCG TCCGTCCGGA ACTTTTCCGC AGTGCAGACC TGATTCTTGT TCCTGACTGC GGCAATGCGG ACGGCACCAT GCTTGAAGTG GCCGAGAAGA GTGTCCTGTG GGTAAAAGTA ACCGTTACCG GCAGGCAGTG CCACGGCTCG CGGCCGGAAG AGGGGATCAA TTCGCTGGTG GGTGCGGCTG CCATGATACT GAAAGTTCAG GACCTGCACA CCAGTTTTGA TCTGCGTAAT GATCTTTTTG TTCCGCCGGT TTCCACGTTT GTGCCCACCA AAAAAGAGGC CAACGTGCCC AACGTGAACA CTGTACCCGG TAATGACGTA TTTTATATCG ACTGCCGTGT ACTGCCTGAA TACGCCCTTG ATGATGTCAT GCAGCAACTG CAGGCCATGG CCGCAGAGGT GGAGACGCAA TACGGAGTGA CCATTGCGCT GGAGCCGGTG CAGCGCGAGC AGGCCACAGC GCCTACGGAT ACGGGTGCCC CTGTGGTTCT TGCTTTGCAG CATGCCGTAA AGTCCGTATA CGGAGCAGAT GCCCGTCCCA TGGGTATAGG TGGCGGCACC GTGGCTGCAG CCTTGCGCCG CAAAGGGCTG CCCGCAGTTG TCTGGAGCAA GATTATCTCC AATGCGCACA CGCCCAATGA GCGCTCGCTC ATTTCGGCCA ATATAGGCGA CGCAAAAGTG ATGCTTCATG TCGCCCTTGC TCCGGCCCGA TAA
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Protein sequence | MLQTLFAYLD TQRDTVVELQ RELTAIPALD PQSEGIGEEA KAEYIIARLR EFGVTDIETV NAPDIRVPCG YRPNVIARIA GRDTSRTFWI ISHMDVVPPG DLDLWDADPY TLRTEGDVLI GRGVEDNQQA IVSSLLMARA LCRHDITPEI NIGLLFVADE ETGNTFGLDH VLAVRPELFR SADLILVPDC GNADGTMLEV AEKSVLWVKV TVTGRQCHGS RPEEGINSLV GAAAMILKVQ DLHTSFDLRN DLFVPPVSTF VPTKKEANVP NVNTVPGNDV FYIDCRVLPE YALDDVMQQL QAMAAEVETQ YGVTIALEPV QREQATAPTD TGAPVVLALQ HAVKSVYGAD ARPMGIGGGT VAAALRRKGL PAVVWSKIIS NAHTPNERSL ISANIGDAKV MLHVALAPAR
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