Gene Dde_1339 details

Gene Information

• Locus tag: Dde_1339
• ID: 3756198
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio desulfuricans subsp. desulfuricans str. G20
• Kingdom: Bacteria
• Replicon accession: NC_007519
• Strand: -
• Start bp: 1357712
• End bp: 1358410
• Gene Length: 699 bp
• Protein Length: 232 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 637782217
• Product: ATPase
• Protein accession: YP_387835
• Protein GI: 78356386
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATGAAA CCGCAGCCCC GCTCATCAGC ACACGCGGAC TTTACCGCAC GTTCACACAG 
GGTGACCTGA CCGTGCAGGC CGTGCGACCG CTTGATATGG ACATCATGCA GGGCGAATTT 
GTGGCCCTGC AGGGAGCTTC CGGCTCGGGC AAATCCACTC TGCTGCATAT ACTGGGACTG 
CTCGACAGGC CCACCGGCGG CAGCTATCAG CTGCACGGGC GTGATGTGGC CACCATGACC 
GATGACGAAC TGAGCGATTA CCGCAACAAG CTCACGGGAT TCGTCTTCCA GAATTTCTAT 
CTCATTCCTT ACTCATCGGC GCTGGACAAC GTGCTCATGC CGGGACTGTA CAGCGATATT 
CCGCTGCGCA CGCTGCGCCA GCGTGCGGCG GATCTGCTGC ATCAGGTGGG GCTGGGCGAC 
AGGATGGACT TCAAACCTTC CAGCCTGTCG GGCGGTCAGC AGCAGCGTGT GGCTCTGGCC 
CGGGCACTGC TGCTCGATCC GGCCCTCATT CTGGCCGATG AACCTACAGG GCAGTTAGAT 
TCCGCCACCA GCGCCGACAT TCTGGACCTG TTCTGCCAGA TAAACGCCAC CGGCAAAACA 
ATTGTCATGG TAACCCACGA CGAAGATACG GCGGCACGAG CCAGACGGCG GCTTTTTTTC 
CGCGACGGAG CCATTGAACG TGAGCACGTC ATGTCATAA 

 

Protein sequence

MNETAAPLIS TRGLYRTFTQ GDLTVQAVRP LDMDIMQGEF VALQGASGSG KSTLLHILGL 
LDRPTGGSYQ LHGRDVATMT DDELSDYRNK LTGFVFQNFY LIPYSSALDN VLMPGLYSDI 
PLRTLRQRAA DLLHQVGLGD RMDFKPSSLS GGQQQRVALA RALLLDPALI LADEPTGQLD 
SATSADILDL FCQINATGKT IVMVTHDEDT AARARRRLFF RDGAIEREHV MS