| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1171 |
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| Symbol | |
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| ID | 3755195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 1195051 |
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| End bp | 1197075 |
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| Gene Length | 2025 bp |
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| Protein Length | 674 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637782041 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_387667 |
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| Protein GI | 78356218 |
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| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
[COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGTCC CGCGCTGCCG GCGTTTTTTT CTCACCCTTT CCGGGCTTGC CGCATGGGCC
GTTCTGTGCC TGTGCACTAC GCTGCTGCAG GCGCAGCCTG TCCGGGCATC GGGCCTGCAG
CCGGTTACGC TGCAACTGCA CTGGACGCAT GAATTCGAGT TTGCCGGTTT TTATGTTGCC
AAAGAAAAAG GCTTTTATGC GGAACGCGGA CTGGATGTGA CCATAATACC CGGCGGGCCG
GGCATAGTGC CGGTGCAGGA GGTGCTGCGC GGCAATGCCC AGTACGGCAT AGGTGCCGCC
GAAGTGCTGC TGGCAAGGCT GCGCGGTGCA CCGCTGGTCA TGCTGGCCGC AGTGTTTCAG
CACTCTGCCA GCTGTATTCT TACCCGGGCG GATTCCGGCA TCTACACCCC TCAGGACCTT
GTGGGCAGAG TCTTTGAAAT GGGCAGGCTG GAAAGCGACG CCGAAACCTA TGCCATGCTG
CATAACGAAG GCATCGACAT CAGCCAGCTG ACCCACGTGG ATTCGACATT CAATCCCCAG
CTGCTGCTGG ACGGCAAGGT TGACGCCATT TCGGCATATT CTTTCAGCCA GCCTTTTTTT
CTGCGCGAGC GGGGCATTCC CTACCGGCTC ATCCGGCCCA TCCAGTATGG TATCGATTTC
TACGGCAATT CCATTTTTTC TTCAGAAAAC GAAGTGCGCA GGCACCCCGA ACGCACAGAG
GCATTCATAG AAGCCAGCAT GAAAGGCTGG GCCTACGCCT TTGACCATGT GGACGAAGCC
GTGGACATCA TTCTGAACAA ATACAGCGAT CACCCCTTTG CCCACTCGCG CGAGCATCTG
CTGTTCGAAG CGGAAGAAAG CCGCAAACTG GTTATGCCGC ATCTGGTCGA TCTGGGGCAC
ATGAATCCCG GCCGCTGGAA ACACATGGCC GACACGCTGG TACAGCTGGG GCTGGCTGAC
GCCGATTATA CGCTGAAAGG CTTTCTTCAT GATCCTGATC TGTCGTCCAG CCTGCTCGCC
CACTGGGGTG TGCGGGCCGG CATAGGCATT CTGGCGGGAG CCGTAGGACT GTGCCTTGTT
CTGCTGCGCT TCAACCGCAG GCTTACCGCG GAAATCGCCT CACGCCGCAA AGCCGAGGAA
CGGACGCTGA GAAGCGAACA ACGGCTTTCG CTGGCGTTGT GGGCGGGCAA TCTGGGCTGG
TGGGACTGGG ACCTGAAATC CGACCATGTA TCGCTGGACA GAACAGCCCA CACCATGCTG
GGCGGCAGCG ACACCCCGCT GCAGACGGCC CTGGAATCCA TGGCCGGCAA CCGCTCTCTT
ACAGGTGCCA TGCCCTTTGT ACATACGCTG CGCAACATGC AGCAAAACGA CACCCGCACC
TTTGAAGAAG AAATGCAGCT TGATACAGGC GGAAAAAAAC GCTGGGTGCT GTGCCGGGGA
CAGATGATCA ACAGTTCCGG CCGCGCCGCC GGTGTTCTCA TGGACATCAG CAAACTGAAG
TCATACCAGC AGGAACTGGA ACAGATGACC ATGACCGACT ATCTGACGGG ACTCTTCAAC
CGCAGGCATT TCTTCCGTCA GCTGGAAACA CATCTGGAGC AGTACAAACG CAGGCAGTAC
AATCTCTGCG TGGCGCTGCT AGACCTTGAC CACTTCAAGC GGATAAATGA CACATACGGA
CACATGGCCG GCGACTCAGT CATCCGCGAG TTTGCCCTCC TGCTGAAGGA ATCGCTGAGG
CCGTACGATG TCGTTGCCCG CTTCGGGGGC GAAGAATTCA TCATCCTGCT GCTGGACAGC
GGACGGGAAG AAGCGCTGGG CATTCTGGAC AGGCTGCTGA AAAAGGTTTC GGGACACACC
TTTGACGCCG AAGGACATCA TCTGAGGGTC ACCTTCAGCG GCGGAATTGC CGAAGCCGAC
GAGCTGCCCG CCTCGGAACT GACCCCGAAG CGCATCGTGG CCGCCGCCGA CCAGCGGCTG
TATCTGGCCA AAACAGCAGG CCGCAACACC ATCCGCATCC GCTAG
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| Protein sequence | MTVPRCRRFF LTLSGLAAWA VLCLCTTLLQ AQPVRASGLQ PVTLQLHWTH EFEFAGFYVA
KEKGFYAERG LDVTIIPGGP GIVPVQEVLR GNAQYGIGAA EVLLARLRGA PLVMLAAVFQ
HSASCILTRA DSGIYTPQDL VGRVFEMGRL ESDAETYAML HNEGIDISQL THVDSTFNPQ
LLLDGKVDAI SAYSFSQPFF LRERGIPYRL IRPIQYGIDF YGNSIFSSEN EVRRHPERTE
AFIEASMKGW AYAFDHVDEA VDIILNKYSD HPFAHSREHL LFEAEESRKL VMPHLVDLGH
MNPGRWKHMA DTLVQLGLAD ADYTLKGFLH DPDLSSSLLA HWGVRAGIGI LAGAVGLCLV
LLRFNRRLTA EIASRRKAEE RTLRSEQRLS LALWAGNLGW WDWDLKSDHV SLDRTAHTML
GGSDTPLQTA LESMAGNRSL TGAMPFVHTL RNMQQNDTRT FEEEMQLDTG GKKRWVLCRG
QMINSSGRAA GVLMDISKLK SYQQELEQMT MTDYLTGLFN RRHFFRQLET HLEQYKRRQY
NLCVALLDLD HFKRINDTYG HMAGDSVIRE FALLLKESLR PYDVVARFGG EEFIILLLDS
GREEALGILD RLLKKVSGHT FDAEGHHLRV TFSGGIAEAD ELPASELTPK RIVAAADQRL
YLAKTAGRNT IRIR
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