Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_0678 |
Symbol | |
ID | 3755865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 694001 |
End bp | 695206 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637781542 |
Product | rhodanese-like protein |
Protein accession | YP_387174 |
Protein GI | 78355725 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0607] Rhodanese-related sulfurtransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.622569 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGTAA TCCGGTCTTT CCCCTTCTGC CGCACATCCA TGCGCCGCAG TCCGCACAAC GTCCTTGCAC CGGCATATGT GCTGCTGGCC CTGTGCTGCC TGCACATGTC CGCCGCGGCA CAACCGCCGT TGCCGCCTCA GCAGCCCGCA TTATCCGCTC ATGCTCCCGG CGCAGCACCG GAAAACAACA CCACCCGCAC CGAACCTCAC TGGCACAAAA CCATGCGCCT GCAGGCCGCC GAACACGGCT ACAGACTGCT TGATCTGGAC GCCGTGGACT CGCTGCCCGA AACCACACTG CTGCTGGATG TGCGCCCCGA TTACGAATTT GCCGCAGGAC ATGTACCCGG TGCGGTCAAC ATGGAATTCG ACCCCGGCGA CACGGATTCG CTTTCCGCGG AAAAAACCCT GCAGCTTCAG CAGACGCTGG GGCCGGACAA AGAACGCATG GTTGTCATCT ACTGCCGCAG CTTCCGCTGC CTGCGCAGCG GGGCGGCGGC AAAGGCCGCT GCGCGTCTTG GCTACACCAA TGTATGGCGT GTGGTGGAAG GATACTTCGG CTGGCTGGAG CAGCACCGGC CCGACCACAG CGGCAGAGCG GACGGCTGTT CGGACAGGCG CACGACACAG GCCCGCACCC TGCCCGACCA CGGTCTGGCC ATACTGGGCG GTGATGCGGA CCGGCGTATT CTGGGATTGC CCGCCGGAGC ACATACGGTA CGGCTGGAAG AGATTCCCTG CGATGTGCTG GTGGTTCTGT TTTTCAACAC ACACTGCACG CAGTGCCGCG AGCAGATGCA GCAACTGGAA CATCTGGCCC GTACCGTGAA CAGCCGTGCG GCAACACAAA GCCACCGGGC GGTGGCCTTT GCAGGTATCG GCGTGCGGGA ATCAAAACGT ACTCTGGCAA GACTGCGCCG CAAACAGGTG CACGCTGTCC CGCTTTTCGC CGACCCCGAT GCCTCGCTGT TTGCCGCTTC GGGCTTTGCG GGCATACCCG GCGCATGGGT CATAGGCCCC GCCGGCGGCA AAGCAACGGA CAGCCCGCAG ACAGGCGGCA GAGCGGTGCT GCTTTCCGTG GCAGGGGACA TTGCGCAAAA TCCGGAGTTC CGGAGTCTGA TTTTCCGGAT GACGAACGTA CCCGCATGGG GTATAAGCGG GCCTCACACG CAGGAAGCGG CTGCCGCTGC AGAAAAGCCG CGGTAG
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Protein sequence | MSVIRSFPFC RTSMRRSPHN VLAPAYVLLA LCCLHMSAAA QPPLPPQQPA LSAHAPGAAP ENNTTRTEPH WHKTMRLQAA EHGYRLLDLD AVDSLPETTL LLDVRPDYEF AAGHVPGAVN MEFDPGDTDS LSAEKTLQLQ QTLGPDKERM VVIYCRSFRC LRSGAAAKAA ARLGYTNVWR VVEGYFGWLE QHRPDHSGRA DGCSDRRTTQ ARTLPDHGLA ILGGDADRRI LGLPAGAHTV RLEEIPCDVL VVLFFNTHCT QCREQMQQLE HLARTVNSRA ATQSHRAVAF AGIGVRESKR TLARLRRKQV HAVPLFADPD ASLFAASGFA GIPGAWVIGP AGGKATDSPQ TGGRAVLLSV AGDIAQNPEF RSLIFRMTNV PAWGISGPHT QEAAAAAEKP R
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