| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0421 |
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| Symbol | |
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| ID | 3756275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 419749 |
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| End bp | 421584 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637781281 |
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| Product | spore coat polysaccharide biosynthesis protein FlmC |
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| Protein accession | YP_386917 |
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| Protein GI | 78355468 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1861] Spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase homolog
[COG3980] Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTTCAGG CCCGCATGGG TTCTGCGCGG CTGAAGGGCA AAATGCTGCT GCCTCTGTGC
GGTCGTCCGC TGGTGGATTA TGTACTCTGT CACCTCACGG CGCTGCTGCG CGGCAGGCGC
CCGACGGAAC AGGCCGTGCT GGACGGTGTG GTGCTGGCCA CATCGGACCG GCCGCAGGAT
GATCCGCTGG CCGCGCACAT ACGCAGACAC TGGCCTGCGG TACACCTCGT GCGGGGGCAG
GAAGACGATG TTCTGGGCCG GTTTGTGACC GCGCTGGATT CCATGCCTGC TGAAAACGTC
ATCCGCGTCA CGGCGGACTG TCCGGTCATC AATGCCGGCG GGCTGCGCCG CATGCTGTAC
GAGCTGCAGC ATACCGGCTG CGACATCGTC AACTACCGTC CGGGAGCGGA ATACGCCGAT
AAAGGCGTTG AAGCGGTTAG CGCAGAGGCG CTGCGGCGGG CGTGGCATCA TCCTTCAGCC
ACGGCGCATG ACAAAGAGCA TGTCACCGCG CTGATGTACC GCCTGCCCGC AGAATTTGCC
GTACGGTACA TAGACGGCGA TCCCCTGCTG AAAAAAGGCG GGGTACGGCT TACCGTGGAT
ACCCCCGCAG ACATGGAATT TTTCACGGGG CTCTGCGCTT CCATGGGGCG CACGCCGGAC
AGTCTCACCG TGCACGACAT CATGCGGCAC CTGCAGCGAC ACCCCCAGCT TGCCGCCGTC
AATGCCTGTG CCGGAGCCAA GACAACCCTG CACGAATCGC TGCGGGCCGC TTTTGTATGT
CACGGCAATG GCCGGACAGG GTACGGGCAC ATATCCGGTG CCCTGCGGCT TGCCCGTGTG
ATGACACAGC AGCTCGGTGC CGGAGTGGAA TTCATCATGC GTCCCGATGA GCGTTCGCAG
CGCCTTGTGA CAGAAGCGGG GTTTGCCGTT TCCCTGCTGC CGCAGGATGC CGCACCGGAA
GATGAACTGC GCTTTGCCGC CCGCCGCTAT GCGCTGGCTG ACCATTCCTG TCTGGTATTC
AATTGCTGCA AGGCAGACCT TGAACGGTAC CAGGACGGCT TTGCCGCTCT GAAAAAAGAA
GGCTGCCGGC TGATATTTCA GGATAACCCC CTGCCGCCCG GATGGCGGCA GGGGGACCTG
CTGCTTAATG CGCTGCCCCA TCCTGATTAT CAGGGGTACT CACCCCATGA ACACCCTGCC
TGTTACGACG GGCTGCAATA CCTGCCGCTG CCCTCCGGAT TCGCCCGTGC GGGAGCACGC
AGAATCATAT CGCCGTCTCT CAGGCGGGTG CTTGTGGCGC TGGGCGGCGG AGACCGCGGC
ACAGTGCTTG AACCGGTGCT GCTGGCCCTG CACGCAGCAG GCTGCACGGC GGCCGTACAG
GTGATATGCG GCACGCGGCA GCAGGCACGC ACCGCTCAGC ACATCATGAA ACACTGCGGG
CTGCGCGGCA GTGCCCTGTG GGATGTGCGC CGCATGGACA AAGCCATGGC ACAGGCCGAT
GCAGGCATTT CCGCGCTGGG TGTGACCACG TATGAAATGG CCGCCACCGG CCTGCCGGTA
CTGCTGGTGA CGGACAACGA CCTGAACAGT GCCGCTGCGG CACAATTTGC CCGCATCGCA
GGCAGCCTGC CGGCCGGAGA TGTCCGTTCC ATACGCGGCG GGCATGTGCT CGAAAGCCCG
TTCTGCAGGC AGTTCATCAA ATCTTTTCAA GAAGTTAGCA AAAGTGATGT GCGCGCGGCC
ATGTCAGTTG CGCACAAACA GGCCGTAGAC GGTAAAGGTG CGTTGCGTGT GGCCGGCATT
TTGCACGATT TTTTCTCCGG AGGAAAAAAA TCATGA
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| Protein sequence | MVQARMGSAR LKGKMLLPLC GRPLVDYVLC HLTALLRGRR PTEQAVLDGV VLATSDRPQD
DPLAAHIRRH WPAVHLVRGQ EDDVLGRFVT ALDSMPAENV IRVTADCPVI NAGGLRRMLY
ELQHTGCDIV NYRPGAEYAD KGVEAVSAEA LRRAWHHPSA TAHDKEHVTA LMYRLPAEFA
VRYIDGDPLL KKGGVRLTVD TPADMEFFTG LCASMGRTPD SLTVHDIMRH LQRHPQLAAV
NACAGAKTTL HESLRAAFVC HGNGRTGYGH ISGALRLARV MTQQLGAGVE FIMRPDERSQ
RLVTEAGFAV SLLPQDAAPE DELRFAARRY ALADHSCLVF NCCKADLERY QDGFAALKKE
GCRLIFQDNP LPPGWRQGDL LLNALPHPDY QGYSPHEHPA CYDGLQYLPL PSGFARAGAR
RIISPSLRRV LVALGGGDRG TVLEPVLLAL HAAGCTAAVQ VICGTRQQAR TAQHIMKHCG
LRGSALWDVR RMDKAMAQAD AGISALGVTT YEMAATGLPV LLVTDNDLNS AAAAQFARIA
GSLPAGDVRS IRGGHVLESP FCRQFIKSFQ EVSKSDVRAA MSVAHKQAVD GKGALRVAGI
LHDFFSGGKK S
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