Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_0021 |
Symbol | |
ID | 3755963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 18872 |
End bp | 19813 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637780874 |
Product | ABC-type transport system involved in resistance to organic solvents periplasmic component-like |
Protein accession | YP_386517 |
Protein GI | 78355068 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.577639 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGGACA GAAAACATAC AACAAAAGAG ATGGTCAGAG CGGGCCTGAC AATAACGCTG GGGCTCGCGG TGCTGGGGCT TTTCATTGTG GCTTTCGGCG GACACAGATT CTGGGAAAAG CTCGACACCT ATCACATCAG ATTTCTGACG GTGAAAGATC TTTCAGTGGG GCGGCCGGTA AAATATGCAG GTATCAACAT CGGGCGTGTG CTAGATATTT CTGTGGATAA GATGGACCCG GGGCAGGTGC ATGTGACCAT CGGCGTGCAG CAGGATTTTG CCGTATATCA GGGCACAGTG GCCAGCATAA CCCAAAAGGG ACTGGTGGGA GATAACTACG TTCTGCTGAG CCTGAAAGCC CGGCCCGGAC AAAAACTGCC GGTACAGAGC GAAATACCCG CAGATACCAG CACTTCGATC TTTGAAGCGG CTGCTTCCGT GGGGCATCTT GTTCAGGAGC TGCATCCCAA GCTGGTACGC ATAGCCGACA GCCTTGATAT ACTGCTTGCC ACGATAAACA GTCAGGACAT GGCAGGAGTG ACCCGGAACA TGAATGCCGT GCTGCACAAC GCAGCACAGG GCATAAAGAC CATGACAACA GAGATACAGG CTGTAAGCGG CGATGCCAGA CAGGGAATAC GTGAAGCGCG CAACGTGATG CGCACAGTGC AGGGCAGCGC GCACAAAGCC GATGAAGCGC TGGAAAGCAC TCGTCTGGCC ATGGAAGCAG TACGGATGCA GACCGAAACG CTGGGCGGCA TGCTGACGGC GCTTTCCGGC AGGTTTGAAG AAAACATGGA ATACGATCAG GCACAGGTGG AAGAAATTTT ACGCAACACG CGGGAACTGA CAGAAAATCT CAATCTGCTT TCGCGCTCTC TGCGGGACAG ACCATGGCAG ATTATCTTTC ATCCGGACGA ATCACACGAA ATAACGAGAT AA
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Protein sequence | MLDRKHTTKE MVRAGLTITL GLAVLGLFIV AFGGHRFWEK LDTYHIRFLT VKDLSVGRPV KYAGINIGRV LDISVDKMDP GQVHVTIGVQ QDFAVYQGTV ASITQKGLVG DNYVLLSLKA RPGQKLPVQS EIPADTSTSI FEAAASVGHL VQELHPKLVR IADSLDILLA TINSQDMAGV TRNMNAVLHN AAQGIKTMTT EIQAVSGDAR QGIREARNVM RTVQGSAHKA DEALESTRLA MEAVRMQTET LGGMLTALSG RFEENMEYDQ AQVEEILRNT RELTENLNLL SRSLRDRPWQ IIFHPDESHE ITR
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