| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_3980 |
|---|
| Symbol | |
|---|
| ID | 8087370 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 4617493 |
|---|
| End bp | 4618992 |
|---|
| Gene Length | 1500 bp |
|---|
| Protein Length | 499 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644838076 |
|---|
| Product | regulatory ATPase RavA |
|---|
| Protein accession | YP_002989555 |
|---|
| Protein GI | 242241374 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0714] MoxR-like ATPases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGCAAC CCACAGCACT GGCTGACCGT ATATCTCGCC TGAGTCATGC GCTAGAACAC
GGCCTCTATG AAAGACAGCA CGTTATTCGA CTTTGTCTAC TGGCTGCACT GAGCGGTGAA
AGCGTTTTTT TGCTGGGCCC GCCGGGAATA GCAAAAAGTT TGATCGCTCG ACGTCTGAAA
TATGCGTTTA AACACGCCAA TGCTTTTGAA TATTTGATGA CTCGTTTTTC TACGCCGGAA
GAAGTATTCG GCCCGCTATC CATTCAGGCG CTGAAAGATG AAGGCCGCTA TCAGCGGCTC
ACCAGCGGTT ATCTGCCGGA AGCCGAAATT GTCTTTCTGG ATGAAATCTG GAAAGCCGGG
CCAGCCATAC TGAACACCCT GCTGACCGCC ATCAACGAAC GCCGTTTCCG CAACGGCAAC
AGTGAAGAAC CCATCCCCAT GAGATTGCTG GTTACGGCAT CCAACGAACT GCCGGAAACA
GACAGCAGTC TGGAAGCATT GTATGACCGC ATGTTGATAC GCCTGTGGCT CGACCGGGTT
CAGGATAAAG GTAATTTTCG CGCCATGCTC ACCACTACCG CCGGCGAACG CGACAACCCG
GTCAACCAGT CATTGAGCGT CAGCGACGAA GAATATTATG AATGGCAATC ACATATCGAT
CATATACCGT TACCGGAATA CTGCTTTGAG TTGATTTATC AACTGCGCCA GCAATTGGAC
GCTCAGGCAA ACGCGCCTTA TGTATCCGAC CGCCGGTGGA AAAAAGCCAT CCGTCTGTTG
CAGGCTTGCG CCTTTTTTAG CGGGCGAGAA ACCATTACGC CGATTGACCT GATCCTACTT
AAAGATTGTC TGTGGCACGA CCTGGATTCC CATACGCTGG TGGAACGGCA ACTGACCCAA
TTGATGACCG AACAAGCCTA CCAGCAAAGG GCGCTGTTGT TCCGTCTGCA ACAACTCAAT
GTCAAACGAC AGCAATATCA GCAACAACAA AGTGAACTGC AAGCGTTTAC AGTAGAGAAG
CAGGTAAACC TTTTCGGCCG CAAGTCTCAT TATTCATTAC CGGACGGCAT CGCTGCATCA
GAAGCGCTGA CGCTGGTATT ACAAAAACCT CTACTCCTAC ACGATCACAC CGTGACACAT
GTGGTGATCG CTGGCTCGGC GCTGGAAACC TGGTTACAGA AAGGCGGTGA AATACGGGGC
AAGCTTAACG GCGTTGGATT TGCCCAACCT ATCGACATGG AAGTGGACGA TCGCCAGCAT
CTGATTATCC GGGACATCAG TCTGCAAAGT TCCATCTTGT CCCTGCCGGG CAAGATCAAT
CGTGACCTGC CTGAAGACAT ACTTCAGGAA TACGAAACGC TGAAAATTCA ATTGCGTGAA
CAGCGTCGTT CATTTGAACG GCATCAACCT TGTTTGTTCG TTCCCCGGGA CTGGTTGGCC
AGTATCGAGG AAAGCCTGCA ACAGGTCGAC GAACAGATAG AACAGTCGCA ACGGGAGTAA
|
|---|
| Protein sequence | MMQPTALADR ISRLSHALEH GLYERQHVIR LCLLAALSGE SVFLLGPPGI AKSLIARRLK
YAFKHANAFE YLMTRFSTPE EVFGPLSIQA LKDEGRYQRL TSGYLPEAEI VFLDEIWKAG
PAILNTLLTA INERRFRNGN SEEPIPMRLL VTASNELPET DSSLEALYDR MLIRLWLDRV
QDKGNFRAML TTTAGERDNP VNQSLSVSDE EYYEWQSHID HIPLPEYCFE LIYQLRQQLD
AQANAPYVSD RRWKKAIRLL QACAFFSGRE TITPIDLILL KDCLWHDLDS HTLVERQLTQ
LMTEQAYQQR ALLFRLQQLN VKRQQYQQQQ SELQAFTVEK QVNLFGRKSH YSLPDGIAAS
EALTLVLQKP LLLHDHTVTH VVIAGSALET WLQKGGEIRG KLNGVGFAQP IDMEVDDRQH
LIIRDISLQS SILSLPGKIN RDLPEDILQE YETLKIQLRE QRRSFERHQP CLFVPRDWLA
SIEESLQQVD EQIEQSQRE
|
|---|
| |