| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_3903 |
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| Symbol | dppF |
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| ID | 8087288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | - |
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| Start bp | 4522527 |
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| End bp | 4523546 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644837994 |
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| Product | dipeptide transporter ATP-binding subunit |
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| Protein accession | YP_002989478 |
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| Protein GI | 242241297 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.62068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAGA CCATGAATGA CGCCGGGCAG CCCTGGTTGC TGCAGGCGAT TGATTTAAAG
AAATATTACC CGGTTAAAAA GGGCATGTTC GCCCCGGAGC GGCTGGTGAA GGCGCTGGAC
GGCGTGTCTT TCACGCTTGA GCGCGGCAAA ACGCTGGCGG TGGTGGGGGA ATCCGGTTGC
GGCAAATCGA CGCTCGGCCG TTTGTTGACC ATGATCGAAA CCCCGACGCA CGGCGAGCTG
TACTACAAGG GACAGGATCT GCTAATACCG GATCCAGCGG CGCAGAAGCT GCGGCGGCAG
AAGATCCAGA TCGTGTTCCA GAACCCTTAT GCGTCGCTCA ATCCACGCAA AAAGGTCGGG
CAGATTCTGG AAGAGCCGCT GGTGATCAAT ACCGATCTCA GCAGGGCGGA GCGTCGTGAA
AAAGCGCTGG CGATGATGGC GAAAGTCGGT TTGAAAACCG AACACTACGA TCGCTACCCG
CATATGTTCT CCGGCGGCCA GCGTCAGCGT ATTGCCATCG CTCGCGGCCT GATGCTCGAG
CCGGATGTGG TGATTGCCGA CGAGCCGGTG TCGGCGCTGG ACGTCTCGGT GCGCGCGCAG
GTGCTGAACC TGATGATGGA TTTGCAGCAG GAGATGGGGC TGTCCTATGT GTTCATTTCC
CATGACCTGT CGGTGGTGGA GCATATCGCC GACGAAGTGA TGGTAATGTA CCTCGGACGC
TGCGTGGAGA AAGGCAGCAA GGCGCAGATT TTCGACAATC CGCGTCACCC TTATACGCAG
GCGCTGTTGT CGGCGACGCC ACGCCTGAAC CCGACGGCCC GCCGTGAGCG CATCAAGCTG
ACCGGCGAGC TGCCGAGCCC GCTTAATCCG CCGCCGGGAT GCGCGTTCAG CGCCCGCTGC
CAGCACCGTT TCGGCACCTG CACCCAGTTG CAGCCGCCGC TGAAAAGCTA CGGCGAACAG
CTGGTGGCCT GCTTTGCGGT TGAGCAGGAA GAAGAGCGGA ACGCAACATC GGTCGAATAA
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| Protein sequence | MSQTMNDAGQ PWLLQAIDLK KYYPVKKGMF APERLVKALD GVSFTLERGK TLAVVGESGC
GKSTLGRLLT MIETPTHGEL YYKGQDLLIP DPAAQKLRRQ KIQIVFQNPY ASLNPRKKVG
QILEEPLVIN TDLSRAERRE KALAMMAKVG LKTEHYDRYP HMFSGGQRQR IAIARGLMLE
PDVVIADEPV SALDVSVRAQ VLNLMMDLQQ EMGLSYVFIS HDLSVVEHIA DEVMVMYLGR
CVEKGSKAQI FDNPRHPYTQ ALLSATPRLN PTARRERIKL TGELPSPLNP PPGCAFSARC
QHRFGTCTQL QPPLKSYGEQ LVACFAVEQE EERNATSVE
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