| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_3092 |
|---|
| Symbol | |
|---|
| ID | 8089928 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 3629298 |
|---|
| End bp | 3630566 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644837170 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_002988682 |
|---|
| Protein GI | 242240501 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.732045 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTAATT CATCGTCCGC ACCGGGCGTA CTGGAAACAT TTTCGCAAAG CCCGCTGTCA
TCAAAAGTTG TCTTGCTCGG CGTGATGATC AACCGGTTGT CCGGGTTTCT GCAAATCTTC
ATCGTGCTGT ATCTGGTGTC ACTCGGTTAT TCGCATCAGC AAACCATCAT TGCCTTGGCA
GTGTACGGCA CCGGTGCCGT TATCGGCGCG CTCCTCGGCG GCACGATCAG CGAGCGCTTC
GGGCCGCGTC TTGCCAGCAT GATCAGCATG GGGGCGACCG CAGTGCTGAC AGCGGCGTTG
CTCTACCTTG ACCACTTTAT TTCCATCCTG ATCGTTGTGG CGCTGGCCAG CCTGTGCGCC
CAATTATTCC GCCCGGCTTC TGCGGCATTG CTGTCCTGGC AAACGCCGTC GGAACGGCAA
ACGATGATTT TTGCTATTTA TCGGCTGGGC CTGAACCTCG GGGCGACGGG GGCGCCGCTC
ATCGGCTATG CCCTTTATCA CTGGGGCGGG GAGAGTTTTA CGCTGTTGTT CTGGGGAGAA
GCGGTTATTG CGGCGCTGTA TGCCGTACTG GCGATGCTGA CCCTGCCGGG GAAAAATGAA
GTCGGGGAAA TCAGTCAACA GGCCGGAGCG GAGAAAACCG TCGTGGGTGG CTACCTGGAT
GTGCTGGCCG ACCGGCGTTT CGTCTTATTT TTACTGGCGA CCTTCTGCCA TTCCGCGGTG
TACGTGCAAT ACATCACCAC ACTGCCTCTC TATATTGAAG ACAAAGGGAT CGCACTGTTC
TGGTATACCC TGGCGGTATC ACTCAACGGA ATAATCGTTA TCTGCTTTGA GCTGTTCATC
ACCAAGTTCA CCCAGGGATA TAACAAACGT TACGTACTGG CGTTCGGTTT TGCGCTGATT
GGTACGGGCG TTGCCTTTTA TGCCGTTCCC ATCGGGCCTG CGGCGTTGAT CGTCGGCACA
CTGATCTGGT CGTTGGGGGA AATCATCTCT GGCCCTTCCT TCTTTGCTTT CCCGGCGAAC
GCCGGTCCGG GGCATCTGAA GTCCCACTAT CTGGGCAGTT TTCACTTCAT GTTCAGTCTG
GGGATTGCGC TGGGGCCGGT TATCGGCGGC TGGCTCTATC TGTCGCTGGA TACGGTCTTC
TGGCCCGTCA TTGCGCTGGG ATCCCTCTTT GCGGCCCTGG TTTGCGGTGC GTGCGTGAAA
GAACCGGCCC CGGCACCGTT GAAAACGGAG GCGGGTACGT CAATGACTTC CAGTGAGGCT
ATCGAGTAG
|
|---|
| Protein sequence | MTNSSSAPGV LETFSQSPLS SKVVLLGVMI NRLSGFLQIF IVLYLVSLGY SHQQTIIALA
VYGTGAVIGA LLGGTISERF GPRLASMISM GATAVLTAAL LYLDHFISIL IVVALASLCA
QLFRPASAAL LSWQTPSERQ TMIFAIYRLG LNLGATGAPL IGYALYHWGG ESFTLLFWGE
AVIAALYAVL AMLTLPGKNE VGEISQQAGA EKTVVGGYLD VLADRRFVLF LLATFCHSAV
YVQYITTLPL YIEDKGIALF WYTLAVSLNG IIVICFELFI TKFTQGYNKR YVLAFGFALI
GTGVAFYAVP IGPAALIVGT LIWSLGEIIS GPSFFAFPAN AGPGHLKSHY LGSFHFMFSL
GIALGPVIGG WLYLSLDTVF WPVIALGSLF AALVCGACVK EPAPAPLKTE AGTSMTSSEA
IE
|
|---|
| |