Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_3043 |
Symbol | |
ID | 8089879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 3539696 |
End bp | 3542311 |
Gene Length | 2616 bp |
Protein Length | 871 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644837127 |
Product | hypothetical protein |
Protein accession | YP_002988639 |
Protein GI | 242240458 |
COG category | [V] Defense mechanisms |
COG ID | [COG1002] Type II restriction enzyme, methylase subunits |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.743399 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCGTCAGG GCAGTAGCCG TAACATCGCT AAAGAGCCTG GTCAGGTCGG TATCAAGAAT AAACTCTGGT TTCAGTCTGC TGCGGAAGGA GAAGAGCTTG AGACTCTGCT AAATCAGTGC ATTGATGACC CAGCGATAGC TAAAAATAAG ATCCGCTTCG TGCTGATCAC TGATTTTACT CGCTTTCTGG CTTGGGATAC CGCAAGTAAA GAGCGGCTCG ACATTGAAAT GGACGAGTTA CATAGCAACT ATGGTTTCTT TTTGCCGTTA GTGGGCCTTG AGAAAGCCAT TATCAGCAGT GAAAACCCTG CTGATGTGAA GGCCGCCGAG AAGATGGGGA GATTGTTTGA CCTCATCCGA GTCCACAATG ACCTCAGTAA GTCGGAAGAT ATCCATGCCC TTAACGTCTT CCTGACTCGC TTGTTATTTT GCCTTTTTGC CGAAGACACC GGTATTTTTG CCCTCGCCCA GTTCACGTCT GCTGTCAAAA GTTTTACCGA AGAAGATGGC AGCGATCTGG ATTCATTTCT TTATCAGTTA TTTGGTGTGT TAGATGAGAA GCCTGACAGC CCGCAGCGGC AAAGGCTACC CGCCCATCTT GCAGCATTTC CGTATGTAAA TGGTGGATTG TTTGCCAGCG ATGAACCGGT TCCCGAACTG CGCAAAAAGG GGCGCAAGAT CTTACTCGAA TGCGGAACCA TGAACTGGAG TGAGATTAAC CCAGACATTT TCGGCAGCAT GTTCCAGGCT GTGATTGATG TGGAACAGCG CAGCCGCTTA GGGCAGCACT ACACTTCATA TCGCAATATC ATGAAGGTGA TTCAGCCCCT GTTTCTTGAT CCGTTACGCG TTGAACTGGA TAAACAACGT AACAATGCCA AGGGGCTTAA AGCGTTACTG GTGCGACTCG GCAAGATCAA AGTATTCGAT CCTGCATGTG GATCCGGTAA TTTCCTGATT GTGGCCTACA AAGCGTTACG CAATCTGGAA ATTGAAGTGA TTGAAGCTCT GCGTGAGCTG GAACCTCAAA CATTTTCAAT GAGCGGTCTT CATCTGTCAC AGTTTTACGG CATTGAGATT GATGACTTCG CCAGCCAGAT CGCTCGGTTA TCCCTCTGGC TGGCGGAGCA CCAGGTGAAT AGTCAGTGGG AAAAAGCGTT TGGTTTCGCG CCACTGGCAT TGCCGTTACG TGAAAGTGGA AATATTCATA GTGGTAATAG CTTGCGTCTT GACTGGTATC AGGTCTGTCC TAAAAAAGTT GATGATGAAG TGTATGTAAT CGGTAATCCG CCCTTTTTAG GAACACTGGG ACGTTCAGAT GAGCAACGTG CTGATATGCA GGCTGTATTT AGCGACTTCA AAGCGTTAGG AACCTTAGAT TTTGTTGCTT GCTGGTTCTG GAAAGGGGCG CAATACATTC AACATTCATG TGCTGAGCTG GCCCTGGTAG CAACCAATTC CATTTGTCAG GGAGAGCAGG TTGCGACACT GTGGCCGCCA ATTTTTTCCC TCGGGCTAAA TATCCATTTT GCTTATCCAA CTTTTCCATG GGTGAACAAT GCCCGTGATA AAGCAGCTGT TCACGTAATT ATCATCGGGT TATCAGCTCA ATCAAGAACA AGAAAATTAT ATCAGAGAGT TAATAGAGAG TGGCATTGTA AGCAGATTGA TAATATTAGT CCGTATTTGA TTGAGGGGAG TAATATTACT ATTTTTTCAC GGAATAAACC GATGGTTAAC GGAGTGTCAT CTTTATTATT TGGCAATAAG CCAACTGATG GTGGACACTT ATTGTTAAGT AGGCAGGAAC GGGATGAGTT ATTAAAAAAA GAACCCAAAT CTGAACGCTG GATTAAGAAA TTGTTGGGGG CCGATGAGTA TTTAAATAGC AAAGAGCGTT GGTGTTTATG GCTGGTAGGG ATAACAAATG ATGAGCTTCA GGCAATGCCA CTTGTTTATC AGCGAGTGCA GCGTGTAGCG GAAACACGCA GGAAAAGTCC TGATAAAGGT GCACAAAAAA TGGCAGAGCG GCCACATCAA TTTCGGGATT TAAATAACCC TAATAACTAT ATCCTAGTTC CCAGCGTGTC ATCAGAGCGT CGCACCTATG TTCCCCTAGG TTTTTTTAAT GCAGAGGTAA TTTCAACAAA CCTTAATTAT ATTATTCCCA ACGGCACACT ATACGAATTC GGCATACTTT CTTCTTTAAT GCATAACGAC TGGATGAGGT TGGTAGCTGG TAGGTTGAAA AGTGACTATC GCTATTCTGC ATCGGTAGTT TACAACCCTT TTCCCTGGCC TGAAGTGACC GAAATACAAC GCAAAGAAAT CGAGATTCTT GCCGAAGACG TGATTTTAAT CCGTGAAGAA TTCCCAGGAC GTACACTCGC TGAACTCTAT GATCCCGATA AGATGCCGCA AAAGCTGTTA ACCGCCCATC AGGCTCTCGA TACCGCGGTG GATCGACTTT ACCGTGAGCC CCCATTCAAA GATGCAGCCG ACCGCTTAAG CTGCCTGCTG GCACGTTATG AAGCACTGAC GCAGAAACTG ACAGTAACTC AGGCTAAACC AAGAAAGAGC AGAACACCGG CCAACGCAGG AAACCATAAT GAATAA
|
Protein sequence | MRQGSSRNIA KEPGQVGIKN KLWFQSAAEG EELETLLNQC IDDPAIAKNK IRFVLITDFT RFLAWDTASK ERLDIEMDEL HSNYGFFLPL VGLEKAIISS ENPADVKAAE KMGRLFDLIR VHNDLSKSED IHALNVFLTR LLFCLFAEDT GIFALAQFTS AVKSFTEEDG SDLDSFLYQL FGVLDEKPDS PQRQRLPAHL AAFPYVNGGL FASDEPVPEL RKKGRKILLE CGTMNWSEIN PDIFGSMFQA VIDVEQRSRL GQHYTSYRNI MKVIQPLFLD PLRVELDKQR NNAKGLKALL VRLGKIKVFD PACGSGNFLI VAYKALRNLE IEVIEALREL EPQTFSMSGL HLSQFYGIEI DDFASQIARL SLWLAEHQVN SQWEKAFGFA PLALPLRESG NIHSGNSLRL DWYQVCPKKV DDEVYVIGNP PFLGTLGRSD EQRADMQAVF SDFKALGTLD FVACWFWKGA QYIQHSCAEL ALVATNSICQ GEQVATLWPP IFSLGLNIHF AYPTFPWVNN ARDKAAVHVI IIGLSAQSRT RKLYQRVNRE WHCKQIDNIS PYLIEGSNIT IFSRNKPMVN GVSSLLFGNK PTDGGHLLLS RQERDELLKK EPKSERWIKK LLGADEYLNS KERWCLWLVG ITNDELQAMP LVYQRVQRVA ETRRKSPDKG AQKMAERPHQ FRDLNNPNNY ILVPSVSSER RTYVPLGFFN AEVISTNLNY IIPNGTLYEF GILSSLMHND WMRLVAGRLK SDYRYSASVV YNPFPWPEVT EIQRKEIEIL AEDVILIREE FPGRTLAELY DPDKMPQKLL TAHQALDTAV DRLYREPPFK DAADRLSCLL ARYEALTQKL TVTQAKPRKS RTPANAGNHN E
|
| |