Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_2957 |
Symbol | |
ID | 8089790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | + |
Start bp | 3446589 |
End bp | 3449153 |
Gene Length | 2565 bp |
Protein Length | 854 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644837039 |
Product | DNA mismatch repair protein MutS |
Protein accession | YP_002988554 |
Protein GI | 242240373 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATGAGT CTATTGACAA GGATCTATCA GACCACACGC CGATGATGCA GCAGTACCTA AAGCTGAAGG CGCAGCATCC TGACATTCTG CTGTTCTATC GTATGGGAGA CTTTTACGAG CTGTTTTACG ACGATGCAAA ACGCGCCTCG CAGCTGATGG ATATCTCGTT GACCAAGCGC GGCGCATCGG CGGGTGAACC GATCCCGATG GCGGGCGTTC CGCACCACGC GGTGGAAAAC TACCTGGCAA AACTGGTTAG CCTTGGCGAA TCCGTAGCGA TTTGCGAACA GATCGGCGAT CCCGCCACCA GCAAAGGGCC GGTTGAGCGC AAAGTCGTCC GCATCGTCAC GCCCGGCACC ATCAGCGATG AAGCATTGCT GCAGGAAAAA CAGGACAACC TGCTGGCCGC CATCTGGCAG GACGGCAAAG GGTTCGGTTA CGCCACGCTG GATATCAGCT CCGGCCGTTT CCAATTGGCG GAGCCCGCCG ATCGGGAAAC CATGGCGGCG GAACTGCAAC GCACCAATCC GGCCGAACTG CTGTACCCGG AAAACTTCGA GGCCATGCCG CTCATTGAGC ATCGGCATGG CCTGCGCCGC CGCCCACTCT GGGAATTCGA GCTGGATACC GCCCGGCAGC AGCTGAATCT TCAGTTCGGG ACCCGCGATC TCACCGGTTT CGGCGTTGAA CAGTCCCGAA TGGGGCTGCG GGCAGCCGGG TGCCTGTTGC AATACGCCAA AGACACGCAG CGTACCTCTT TGCCGCATAT CCGCAGCATC ACCATGGAGC GGCAACAGGA TGGCATCATC ATGGATGCCG CCACCCGGCG TAATCTGGAA CTGACGCAAA ATCTTTCCGG CGGTACGGAG AATACATTGG CGGCAGTGCT GGATCGCACT GTCACACCGA TGGGCAGCCG TATGCTGAAA CGCTGGTTGC ATATGCCGGT TCGCGATGCC CACTTGCTGA TGCAACGCCA ACAGGCAGTG GGCGCCTTGC AGGATATCGC CCATGAGCTA CAGCCTTTCT TGCGCCAGAT CGGCGATTTG GAACGTATCC TCGCCCGGTT GGCGCTACGA ACCGCCCGCC CACGCGATCT AGCCAGAATG CGCCACGCCT TCCAGCAACT GCCGGATATC CATGCCCTGC TGGCCAGGGT AGACGTCGAC TTCATCCGAC AACGGGATGC CCAAATCGGC CAGTTTGATG ACCTGCGCGC CCTGCTGGAG CGCGCCATCA TCGAGTCCCC GCCGGTACTG GTTCGCGACG GCGGCGTCAT CGCCAGCGGC TACAACGAGG AACTGGACGA ATGGCGGCGA CTGGCGGACG GCGCCAGTGA CTATCTGGAT AAACTGGAAA TCCGCGAACG CGAACGGCTG GGCATAGATA CGCTGAAAGT CGGCTTCAAC GGCGTTCATG GATACTATAT CCAGGTGAGT CGCGGCCAAA GCCACCTGGT ACCCATGAAT TACGTCCGCC GCCAGACATT GAAAAATGCG GAACGCTACA TTATTCCGGA GCTGAAGGAA TATGAGGACA AGGTTCTGAC GTCTAAAGGC AAGGCTCTGG CGTTGGAGAA AGCGCTTTAT GACGAGTTGT TCGATCTGCT GCTGCCGCAC TTGGCCGAAT TGCAGCAAAG CGCCAGCGCG TTGGCGGAGC TTGATGTACT CGCCAATCTG GCCGAACGCG CTGATACGCT GAATTACGTT TGCCCAACCT TAAGCGACAA ACCCGGCATC AGAATCACCG GCGGCCGTCA TCCGGTGGTG GAGCAGGTAC TTAGCGAACC GTTCATCGCC AACCCGCTGT CGCTGTCGCC GCAACGTCGC CTGCTGATCA TCACCGGCCC TAACATGGGC GGCAAAAGCA CCTATATGCG TCAGGCAGCG TTGATCGTAC TGATGGCGCA TATCGGCAGC TACGTCCCAG CCGAACAGGC AAGCATCGGC CCGGTAGATC GCATATTCAC CCGTGTCGGC GCCGCCGACG ATCTGGCATC TGGACGCTCT ACATTCATGG TGGAAATGAC GGAAACCGCC AATATTCTGC ATAACGCCAC AGAACACAGC CTGGTGCTGA TGGATGAAAT CGGGCGCGGT ACATCCACCT ACGACGGCCT GTCGCTGGCC TGGGCCTGTG CGGAAACGCT GGCCAACAAA ATCAAGGCGA TGACGCTGTT CGCCACCCAC TATTTTGAAC TCACCAATTT GCCGGAAAAG ATGGAAGGCG TGGTCAACAT CCACCTGGAT GCGTTGGAAC ACGGCGAAAC CATTGCGTTT ATGCACAGCG TGCAGGACGG TGCGGCCAGT AAGAGTTATG GTCTGGCGGT CGCCGCGCTG GCCGGCGTGC CCAAAGACGT CATCAAGCGG GCCCGTCAAA AACTGAAGGA GTTGGAATCT CTCGCCGGCC ATGCTTCCAG CAGTCATGTG GACGGTTCAC AACTGGCGTT GCTCAGCCCT GAAGAACCGT CGCCGGCGGT TGAAGCGCTG GAATCCATTG ACCCGGACAG CCTGACGCCG CGCCAAGCGC TGGAATGGCT CTATAAGCTG AAAAATATGC TGTAA
|
Protein sequence | MNESIDKDLS DHTPMMQQYL KLKAQHPDIL LFYRMGDFYE LFYDDAKRAS QLMDISLTKR GASAGEPIPM AGVPHHAVEN YLAKLVSLGE SVAICEQIGD PATSKGPVER KVVRIVTPGT ISDEALLQEK QDNLLAAIWQ DGKGFGYATL DISSGRFQLA EPADRETMAA ELQRTNPAEL LYPENFEAMP LIEHRHGLRR RPLWEFELDT ARQQLNLQFG TRDLTGFGVE QSRMGLRAAG CLLQYAKDTQ RTSLPHIRSI TMERQQDGII MDAATRRNLE LTQNLSGGTE NTLAAVLDRT VTPMGSRMLK RWLHMPVRDA HLLMQRQQAV GALQDIAHEL QPFLRQIGDL ERILARLALR TARPRDLARM RHAFQQLPDI HALLARVDVD FIRQRDAQIG QFDDLRALLE RAIIESPPVL VRDGGVIASG YNEELDEWRR LADGASDYLD KLEIRERERL GIDTLKVGFN GVHGYYIQVS RGQSHLVPMN YVRRQTLKNA ERYIIPELKE YEDKVLTSKG KALALEKALY DELFDLLLPH LAELQQSASA LAELDVLANL AERADTLNYV CPTLSDKPGI RITGGRHPVV EQVLSEPFIA NPLSLSPQRR LLIITGPNMG GKSTYMRQAA LIVLMAHIGS YVPAEQASIG PVDRIFTRVG AADDLASGRS TFMVEMTETA NILHNATEHS LVLMDEIGRG TSTYDGLSLA WACAETLANK IKAMTLFATH YFELTNLPEK MEGVVNIHLD ALEHGETIAF MHSVQDGAAS KSYGLAVAAL AGVPKDVIKR ARQKLKELES LAGHASSSHV DGSQLALLSP EEPSPAVEAL ESIDPDSLTP RQALEWLYKL KNML
|
| |