| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2583 |
|---|
| Symbol | |
|---|
| ID | 8086973 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 3027567 |
|---|
| End bp | 3029060 |
|---|
| Gene Length | 1494 bp |
|---|
| Protein Length | 497 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644836653 |
|---|
| Product | protein of unknown function DUF112 transmembrane |
|---|
| Protein accession | YP_002988182 |
|---|
| Protein GI | 242240001 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3333] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACCT GGTCTTTTCT CATGCAAGGA TTTTCCGTCG CCATGACGCC GGGAAATCTG
ACCATCGCCT TAATCGGCTG TTTTATTGGT ACCGTTGTTG GTCTCCTGCC CGGTTTAGGC
CCGATTAACG GCGTAGCCAT CCTGATGCCG CTGGCCTTTG CGCTGAAGCT GCCGGCTGAT
TCCGCCTTGA TCCTGCTGGC GACGGTTTAT CTCGGCTGCG AATACGGCGG CCGCATTTCC
TCCATCTTAC TGAACGTTCC AGGCGATGCA GGCGCCATCA TGACCGCACT CGATGGCTAT
CCCATGGCGC AACAGGGGAA AGCCGGCGTG GCGTTATCCA TCTCCGCCGT CAGTTCGTTC
ATCGGTTCCA ACATCGCGAT TCTGGGCATT ATTCTATTTG CACCGCTGCT GGCTAACTGG
TCTCTCGCCT TCGGCCCGGC GGAATATTTC GCGCTGATGG TTTTCGCCAT CGCCTGCCTT
GGCAGCATGA TGAGCCAAAA TCCGCTGAAG TCCTTCTTAG CCGCGCTGAT CGGGCTCGCC
ATGGCAACCG TCGGTGTCGA TGCCAACACC GGCGTTTATC GATTTACATT CGACATTATC
CACCTTTCCG ACGGTATCCA GTTTGTCGTC GTCGTTATCG GGTTGTTCTC CGTCAGCGAA
ATCCTGCTGA TACTGGAAAA CACCAGCAGC GGGCAAAACG TCATCAAAAA AACGGGACGC
ATGTTGTTTA ATGCGCAGGA AGGATTGCAC TGCCTCGGCG CCACGCTGCG CTCGTCGCTA
TTAGGTTTTT TCGTCGGCAT TCTTCCCGGC GCCGGCGCCA CTATCGCCAG CGCAATGGCG
TGGATGACGG AGAAAAAACT CAGCGGCAAC AGCGAGGCGT TTGGTAAAGG AGAAATTCGC
GGCGTCGCCG CGCCGGAAGC CGCCAACAAT GCTTCAGCCT GCGGCTCTTT CATCCCGATG
TTAACGCTCG GGATCCCCGG TTCCGGTACA ACAGCGGTCA TGGTTGGCGC GCTCACGCTC
TACAACATTA CCCCTGGCCC CGCCATGTTT ACCGAACAAC CGGATATCGT CTGGGGGTTA
ATTGCCGCAT TGCTCATCGG CAACCTGATG TTGTTACTGC TCAACTTACC GCTGATCGGC
GTGTTTACCC GCATGCTCGC CATTCCCATG TGGATACTGG TTCCGGTTAT CACCGCGATC
TCGGCTGTCG GCGTGTATGC GGTTCACAGC ACCACCTTTG ATCTGCTGCT GATGGTTGGG
CTGGGCGTTT TCGGTTATAT CCTGCGAAAA ATGCATTTTC CCATGTCGCC ACTGATTCTC
GGCTTCGTAC TCGGTGAAAT GCTGGAGCAG AACCTGCGGC GCGCCCTCTC CATCAGTAAT
GGCCATCTAT CGATTCTCTG GGAAGGGAAT ATCAGTAAGT TCCTGTTAAT ACTCTCCGTA
CTGGTCTTGT CAGCGCCGCT GCTGATGAAA TACTGGCGCC GGCGCCGCGC CTGA
|
|---|
| Protein sequence | METWSFLMQG FSVAMTPGNL TIALIGCFIG TVVGLLPGLG PINGVAILMP LAFALKLPAD
SALILLATVY LGCEYGGRIS SILLNVPGDA GAIMTALDGY PMAQQGKAGV ALSISAVSSF
IGSNIAILGI ILFAPLLANW SLAFGPAEYF ALMVFAIACL GSMMSQNPLK SFLAALIGLA
MATVGVDANT GVYRFTFDII HLSDGIQFVV VVIGLFSVSE ILLILENTSS GQNVIKKTGR
MLFNAQEGLH CLGATLRSSL LGFFVGILPG AGATIASAMA WMTEKKLSGN SEAFGKGEIR
GVAAPEAANN ASACGSFIPM LTLGIPGSGT TAVMVGALTL YNITPGPAMF TEQPDIVWGL
IAALLIGNLM LLLLNLPLIG VFTRMLAIPM WILVPVITAI SAVGVYAVHS TTFDLLLMVG
LGVFGYILRK MHFPMSPLIL GFVLGEMLEQ NLRRALSISN GHLSILWEGN ISKFLLILSV
LVLSAPLLMK YWRRRRA
|
|---|
| |