| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1284 |
|---|
| Symbol | |
|---|
| ID | 8087846 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 1467475 |
|---|
| End bp | 1468422 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644835365 |
|---|
| Product | respiratory-chain NADH dehydrogenase subunit 1 |
|---|
| Protein accession | YP_002986908 |
|---|
| Protein GI | 242238727 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0650] Formate hydrogenlyase subunit 4 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0584834 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACAAA CCGCCTTGTT GATTCCCCTC GTCTGCGCGC TGTTGCAGGC AGTGGTCATG
ATGGCGGCAG CTCCGCTGCT GTCCGGTATG TCCCGCGTGA TCCGCGCCAA AATGCACTCC
CGCCAGGGCC CCGGCGTGTT GCAAGACTAC CGCGACCTGT TCAAATTGCT GCGTCGTCAG
GAAGTGGCGC CCCAACACAG CGGCGGCGTA TTTCGTCTGA TGCCGTTCGT GCTGCTGGGC
ACCATGCTGC TGGTGGCGAT GACACTGCCG GCCGTAACCG ATGCCTCGCC GTTCGGCGCC
GGCGGCGATG TGATCACCCT GCTGTATCTG TTCGCGGTGT TTCGTTTCTT CTTTTCGCTG
GCAGGGCTGG ATTCCGGCAG CACCTTCGCC GGCATCGGCG CCAGCCGCGA GCTGACGCTC
GGCATTCTGG TGGAACCCAT CCTGATGCTC GCCCTGTTGG TGGTGGCGTT GATCGCCGGT
TCGACCAACA TCGGCAACAT CAGCCAGCAT CTGGCCGGCG GTAACTGGAC GTCGCCCACC
GCTACCGGGC TGGCGCTGCT GGCCTGCGCC TTCGCCACCT TCATCGAGAT GGGGAAAATC
CCGTTCGACG TGGCGGAAGC GGAACAGGAA CTGCAGGAAG GGCCGCTGAC CGAATACGCC
GGCGCCGGTC TGGCGTTGGT GAAATGGGGC ATCAGCCTCA AGCAGGTGGT GGTCGCCGCG
CTGTTTCTGT CGATTTTCAT CCCGTTCGGT AAGGCGGCCG CCTTTTCTGC CGCCGGTCTG
CTGTGGGGAA CGCTACTGCT GTTCGTCAAA CTGGTGGTGG TGTTCGTCAT CGCCGCGCTG
ATTGAAAACA GTCTGGCGCG CGGACGTTTC CTGCTAACCG GGCGCGTTAC CTGGCTGGGC
TTCGGCGTTG CGGCGCTGGC GTTCGTTTTC TACCTCACCG GTCTATAA
|
|---|
| Protein sequence | MTQTALLIPL VCALLQAVVM MAAAPLLSGM SRVIRAKMHS RQGPGVLQDY RDLFKLLRRQ
EVAPQHSGGV FRLMPFVLLG TMLLVAMTLP AVTDASPFGA GGDVITLLYL FAVFRFFFSL
AGLDSGSTFA GIGASRELTL GILVEPILML ALLVVALIAG STNIGNISQH LAGGNWTSPT
ATGLALLACA FATFIEMGKI PFDVAEAEQE LQEGPLTEYA GAGLALVKWG ISLKQVVVAA
LFLSIFIPFG KAAAFSAAGL LWGTLLLFVK LVVVFVIAAL IENSLARGRF LLTGRVTWLG
FGVAALAFVF YLTGL
|
|---|
| |