Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_1268 |
Symbol | |
ID | 8087830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 1450903 |
End bp | 1453053 |
Gene Length | 2151 bp |
Protein Length | 716 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644835349 |
Product | formate dehydrogenase, alpha subunit |
Protein accession | YP_002986892 |
Protein GI | 242238711 |
COG category | [R] General function prediction only |
COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.424555 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAGAAAG TGATTACCGT CTGCCCCTAC TGCGGGTCAG GCTGCAAAAT TAACCTGTTG GTGGAAAATG GCAAAGTGGT TGGCGCCGAA GGGGCCAACG GTCTCACCAA CGAAGGTGAG CTGTGCCTGA AAGGCTATTA CGGCTGGGAT TTCCTCAATG ACACCAAGTT ACTGACCCCG CGTCTGAAAC AGCCGATGAT CCGCCGCCAG AAAGGCGCGC CGTTTGAAGT GGTGTCCTGG GACGAGGCCA TCGAGTTCGC CAGTTCCCGT TTGAAAGCCA TCAAGGAAAA ATACGGCCCG GACGCCATCA TGCACACCGG CTCTTCTCGT GGCCCGGGCA ACGAAACCAA TTTCGTCATG CAGAAATTCG CCCGCGCCGT CACCGGCACC AACAATATCG ACTGCTGTGC TCGCGTATGT CACGGCCCGT CGGTATCCGG TTTGCAGGTC ACGCTGGGCA ACGGCGCGAT GAGTAACTCG ATTTGCGAAA TCGAAAAAAC CGACTGCATT CTGGTGTTCG GCTACAACGC CGCCGACTCC CACCCGATCG TGGCGCGCCG CATCATCAAA GCGAAAGAAC GCGGCGCCAA GATCATCGTC TGCGACCCGC GTCACATTGA AACCGCCCGC ATCGCCGATC TGTGGTTGCC GCTGAAAAAC GGCTCCAACA TGGCGCTGGT GAACGCCTTC GCCAACGTGC TGATCAACGA AGGGTTGTAC AACCAGAGCT TTGTGTCTGC GCACACCGAA GGGTTCGAGG AATACCGCAA TCTGGTGGCG AAATACACGC CGGAATATGT GGCGGACATC ACCGGCCTCA GTCCGCAATT GATCCGTGAA GCCATCCGTA TGTATGCCGC TGCGCCGTCC GCCACCATTC TGTGGGGCAT GGGCGTAACC CAGTGGACGC AAGGGGTCGA CGTGGTGAAA GGCCTGTCCG GCCTGGCGCT GCTGACCGGC AACCTCGGCC GCCCGAACGT GGGCGTCGGC CCGGTGCGCG GTCAAAACAA CGTGCAAGGT GCCTGCGATA TGGGCGCGTT GCCGAACCAA TTCCCCGGCT ATCAGAAAGT CACCGACCCG GAAATCCGTG AGAAATTCGC CAAAGCCTGG GGCGTGCCGT CGTTGTCTGA CCGCATCGGT TACTCGCTGA CCGACGTACC GCACATGATC AAGGAAGGCA AGATCAAGGC CAACTACCTG ATGGGCGAAG ACCCGTTGCA GACCGAGCCG GACCTGTCGG TAGTACGGCA GACCTTCGCC GAACTGGAAT TGTTGATCGT TCAGGATATT TTCATGACCA AAACCGCCGC GATGGCGGAT GTGATCTTCC CGGCGACGTC CTGGGGCGAA CACGAAGGGG TTTATTCGGC GGCCGACCGT GGCTTCCAGC GCTTCTATAA AGCGGTGGAA CCGCAGGGCA ACGTCAAGCC GGATTGGGAA ATCATCAGCC TGATGGCTAC CGCCATGGGC TACCCGATGC ACTACAACAA CACCCAGGAA ATCTGGGATG AGCTGCGCCA TTTGTGCCCA CTGTACTACG GTGCGACCTA CGACAAGATG GCCGGGCTGG GCTATATTCC CTGGCCGTGT CTGACCGAAG ACAGCCCAGG AACACCGTGG CTGTATGCCG GCAACAAGTT CGACCGCCCC AACGGCAAAG GGCTGTTGTT CGCCACCGAA TGGCACCCGC CGATGGAGCA GACCGACGCC GAGTATCCGC TGGTGCTCTC CACCGTGCGT GAAGTGGGTC ACTACTCCTG CCGTTCCATG ACCGGCAACT GTACCGCGTT GCAGACGCTG GCCGACGAAC CCGGCTATGT GCAGATGAAC CCGGAAGACG CCGCCGCTCT CGGCGTGCGC GACCAGCAGT TGGTGTGGGT CGCTTCCCGC CGCGGCAAAG TGATCAGTCG CGCCATGGTC AGCGAACGCA TTAACAAAGG GGCGGTATAC ATGACCTACC AGTGGTGGAT CGGCGCCTGT AACGAACTGA CGCTGGATGA AGTGGATCCG ATCTCCAAAA CACCGGAGTA CAAACACTGT GCCGTGAAAC TGGAGGCTAT CGCCGATCAG AACTGGGCGG AAAACTATGT CGTTCAGGAA TACAGCGCAC TGAAGGCGCG TCTGCGTAAA GAAGCGGAAG TCGCGGGTTA A
|
Protein sequence | MQKVITVCPY CGSGCKINLL VENGKVVGAE GANGLTNEGE LCLKGYYGWD FLNDTKLLTP RLKQPMIRRQ KGAPFEVVSW DEAIEFASSR LKAIKEKYGP DAIMHTGSSR GPGNETNFVM QKFARAVTGT NNIDCCARVC HGPSVSGLQV TLGNGAMSNS ICEIEKTDCI LVFGYNAADS HPIVARRIIK AKERGAKIIV CDPRHIETAR IADLWLPLKN GSNMALVNAF ANVLINEGLY NQSFVSAHTE GFEEYRNLVA KYTPEYVADI TGLSPQLIRE AIRMYAAAPS ATILWGMGVT QWTQGVDVVK GLSGLALLTG NLGRPNVGVG PVRGQNNVQG ACDMGALPNQ FPGYQKVTDP EIREKFAKAW GVPSLSDRIG YSLTDVPHMI KEGKIKANYL MGEDPLQTEP DLSVVRQTFA ELELLIVQDI FMTKTAAMAD VIFPATSWGE HEGVYSAADR GFQRFYKAVE PQGNVKPDWE IISLMATAMG YPMHYNNTQE IWDELRHLCP LYYGATYDKM AGLGYIPWPC LTEDSPGTPW LYAGNKFDRP NGKGLLFATE WHPPMEQTDA EYPLVLSTVR EVGHYSCRSM TGNCTALQTL ADEPGYVQMN PEDAAALGVR DQQLVWVASR RGKVISRAMV SERINKGAVY MTYQWWIGAC NELTLDEVDP ISKTPEYKHC AVKLEAIADQ NWAENYVVQE YSALKARLRK EAEVAG
|
| |