| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0978 |
|---|
| Symbol | |
|---|
| ID | 8088095 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 1117242 |
|---|
| End bp | 1118930 |
|---|
| Gene Length | 1689 bp |
|---|
| Protein Length | 562 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644835051 |
|---|
| Product | peptidase U34 dipeptidase |
|---|
| Protein accession | YP_002986606 |
|---|
| Protein GI | 242238425 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4690] Dipeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGCACTA CAATGATCAT CACCCGCGGC GCCACCGCCG ACGGCTCGAC GATGGTGACT
CACTCGGACG ACGACGAGCT GGCGGATCAG CGCTTCATCC ATGTGCCGGC GCAACGCCAT
GCGCCGGGCA GCTTACGCGG GATCGTCGAC GGCACCAACG TCAGCTATCC GCGCCTTATC
AGTCAGGATC GGGGCGCCGG TTATCAAACG CCAGGCTGGC CGGAAACGCC GTTGATCGGC
GCAATCCCCC AAGTTGAGCA CACTTACGCC TACTTCGACG GCAACTACGG CATCATGAAC
GAACACCATC TGATGTTCGG CGAATGCACC AACGGCGCCA AATACGAGCC GACGCACGTC
ACCGTGGAAC AGGCGGCCGA AAACGACACC CATTGCCGCT TGTTCTACAG CGCCGAGCTA
TCGCGCATTG CGCTGGAACG CTGCAAAACC GCCCGGGAAG CGGTAGAACT GATGGGATCG
CTGATTGACA CCTACGGTTA TTTCTCCACC GGCGAAACCC TGCTGGTCGC AGATGACCAC
GAGGGCTGGG TGTTTGAAAT GTGCGCGCTG CCGGATGACC TCTATCATTC GGCCTGGGTG
GCCCAGCGCG TCCCGGACGG CACTGTTTTC GTGGCGGCGA ACGAATTCCG CATCCGGGAA
ATCCGGGAAG GCGACCCGGA TCAGCTGTTC TCCCGCCATC TGCTGCCCGG TCTGAAAAAA
GTCGGTTGGG CGACGCCGGA ACAAGGCCCG GTCGACTGGC TGAAATCGGT CAGTTGGGGG
GAATACAACC ACCCCTACTA TTCGCTGCGC CGCGTCTGGC GCATCTTCGA TCGCCTCAAC
CCGGATCTCG GCCTCAGCCC GTGGGTAAAC GGCGGCAGTT ACACCACCGA TTACCCCTTC
TCGGTCACGC CCAAAACCCC GCTCGTCGCC CGCGACCTGT TCGCGCTGTA CCGCGACCAC
TACGAAGGCA CGCCGTTCGA CCTGACCAAA GGCGTCGCGG CCGGCCCCTA CGGCGATCCC
AATCGCTACG TCGGCCCCTA CGACGGCAAC CAGAATAACG TGTCCAGCGA CCGCACATTG
CACGGCGCCT GGGAGCGCGC CATCTCGGTG TTCTATCAGG GTTATACCTA TGTGGCGCAA
ACCCGTCCCA CCGCGCCGGA ACTGACCCGC GGCATCGTCT GGTTCGGCCC GGACGTGGCT
TACACCACCT GTTTTACGCC CTTCCCGGCC AAACTTCCCG ACCTGCCCGC CGCCTACCAG
AGCGGCGATC CTCAGCAGTT CGATCGCCGG GCGGCGTGGT GGGCGTTCGA TTTCGTCGCC
AACTGGGCCC GGCTCAACTA CCAGCGGATG TACCACGTAG ACATCCAGCC ATTACAACAG
CAATTGGAAG CGCAACAGGA AATGCGCGTG GCGGCGTGGG ACGACGCCAT GGCGCAGCAA
CCGGATCCGG CGCAGTTGGC CCGGCTGTGC GACGATAACG CCGGTGAGAT CCTCACTCGC
TGGTGGGCGC TGGCGGACAT GCTGATCGCC AAATACTCCG ACGGCTACAT CAATCCGCCG
CCGCAACGCC CGCAGAATCA GCCCGCGATC CCCATCGGTT ATCCGGCCGA CTGGCTGGGC
ATCACCAACT ATCGCGACGG GCCGACCGAC TACGACATGC CGGTCTCCCC GGCGGCTACC
CGCCGCTGA
|
|---|
| Protein sequence | MCTTMIITRG ATADGSTMVT HSDDDELADQ RFIHVPAQRH APGSLRGIVD GTNVSYPRLI
SQDRGAGYQT PGWPETPLIG AIPQVEHTYA YFDGNYGIMN EHHLMFGECT NGAKYEPTHV
TVEQAAENDT HCRLFYSAEL SRIALERCKT AREAVELMGS LIDTYGYFST GETLLVADDH
EGWVFEMCAL PDDLYHSAWV AQRVPDGTVF VAANEFRIRE IREGDPDQLF SRHLLPGLKK
VGWATPEQGP VDWLKSVSWG EYNHPYYSLR RVWRIFDRLN PDLGLSPWVN GGSYTTDYPF
SVTPKTPLVA RDLFALYRDH YEGTPFDLTK GVAAGPYGDP NRYVGPYDGN QNNVSSDRTL
HGAWERAISV FYQGYTYVAQ TRPTAPELTR GIVWFGPDVA YTTCFTPFPA KLPDLPAAYQ
SGDPQQFDRR AAWWAFDFVA NWARLNYQRM YHVDIQPLQQ QLEAQQEMRV AAWDDAMAQQ
PDPAQLARLC DDNAGEILTR WWALADMLIA KYSDGYINPP PQRPQNQPAI PIGYPADWLG
ITNYRDGPTD YDMPVSPAAT RR
|
|---|
| |