| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0803 |
|---|
| Symbol | |
|---|
| ID | 8089939 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 910704 |
|---|
| End bp | 911870 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644834875 |
|---|
| Product | ABC branched chain amino acid family transporter, periplasmic ligand binding protein |
|---|
| Protein accession | YP_002986436 |
|---|
| Protein GI | 242238255 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.123562 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTCAT CAGCCCCCAT CAACATCGGT TTACTCTACT CTTCCCGCGG CGTCACCGCG
CTGCTGGAGC AATCCCAGCT GCGGGGCGCG CTGCTGGCGA TCGGCGAAAT CAACCAGTCG
GGCGGTATCA ACGGCCGTCC GCTGCGGGCT ATTCATCTGG ATCCGCTATC GGACAACGCC
CTGTTCCGCT CGCTGGCGGA ACAACTGATT GTGGAGCATC AGGTCAACGT CATCTTCGGC
GGCTACACCT CCAGCAGCCG CAAGGCAATG ACGCCGGTGG TGGAGAAACA CCAACGCCTG
CTGTTCTACT CCCAGCTGTA TGAAGGGTTT GAATTCTCGG AAAATATTTT CTACGGCGGC
GCGGCGCCCA ACCAGAACTG CGTCCAGCTG GAGGACTATC TCTCCAGCCA GTTCGGCGCC
CGGGTGTTCA TGATCGGTTC GCGTTATATC TATCCATACG AATGCAACCG CAATATGCAG
GAGCTACTGC TGCAACGGGA CGACGGCGCG GTGATCGGCG AACGCTATCT TGACCTGAAC
GCGCCATACG ACGCCTTTCT GGCGGTGATG GACGAGGTGC GCAGAAAACA GCCGGACTTC
ATCTTCAGCA CCGTCATCGG CCAAACGGTG CCCTACTTAT ACCGTGCCTA TTATGAACAG
GGGCTCGACC CGGAAACCAT GCCCATCGGC AGCCTTAACA CCTCGGAAAC CGAGATAGCC
GTGATGGGCG CCGATATGGC GGCGGGCCAC TTCACTTCAT CGCCCTATTT CCAAAGCATC
GCGACCCCGG CGAATCAGGC GGCGCTGGCG AAATTCCGCC TGATGTTCGG CCCGACGCTG
ACTACCGATA TGAATTGGGA GGCGACCTAC AGCCAGGTGC ATCTGTTCGC CAACGCCATG
CGTAGTTGCG ACAGCGACAG CGCTGCGCTG CTGCGTCCGG CGCTGTACGG CAGTGAGTTC
GACGCGCCGC AGGGGCGCAT TCGCGTCGAT CCGCTCAATC ACCATACCGG CCTCTACCCG
CGCATCGGCC AGTCCAACCC GGACGGCCAG TTCACCATTG TGCGGGAATC GCGCCGTATC
GTTCCGCCCG ACCCCTACAT GACCAATCAG GTTCAGGGGG ACTGGGTCAC TAAACTGTCA
AAAGTGGAGT ATCCCCATGC GCCATAA
|
|---|
| Protein sequence | MASSAPINIG LLYSSRGVTA LLEQSQLRGA LLAIGEINQS GGINGRPLRA IHLDPLSDNA
LFRSLAEQLI VEHQVNVIFG GYTSSSRKAM TPVVEKHQRL LFYSQLYEGF EFSENIFYGG
AAPNQNCVQL EDYLSSQFGA RVFMIGSRYI YPYECNRNMQ ELLLQRDDGA VIGERYLDLN
APYDAFLAVM DEVRRKQPDF IFSTVIGQTV PYLYRAYYEQ GLDPETMPIG SLNTSETEIA
VMGADMAAGH FTSSPYFQSI ATPANQAALA KFRLMFGPTL TTDMNWEATY SQVHLFANAM
RSCDSDSAAL LRPALYGSEF DAPQGRIRVD PLNHHTGLYP RIGQSNPDGQ FTIVRESRRI
VPPDPYMTNQ VQGDWVTKLS KVEYPHAP
|
|---|
| |