More than 300 homologs were found in PanDaTox collection
for query gene Dd703_0803 on replicon NC_012880
Organism: Dickeya dadantii Ech703



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012880  Dd703_0803  ABC branched chain amino acid family transporter, periplasmic ligand binding protein  100 
 
 
388 aa  804    Dickeya dadantii Ech703  Bacteria  normal  0.123562  n/a   
 
 
-
 
NC_010676  Bphyt_5753  ABC branched chain amino acid family transporter, periplasmic ligand binding protein  63.02 
 
 
384 aa  504  9.999999999999999e-143  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.887831 
 
 
-
 
NC_008786  Veis_4902  branched chain amino acid ABC transporter periplasmic ligand-binding protein  55.41 
 
 
405 aa  452  1.0000000000000001e-126  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.278899 
 
 
-
 
NC_010002  Daci_3638  branched chain amino acid ABC transporter periplasmic ligand-binding protein  57.41 
 
 
382 aa  448  1e-125  Delftia acidovorans SPH-1  Bacteria  normal  0.13399  normal  0.0727576 
 
 
-
 
NC_007511  Bcep18194_B1846  branched chain amino acid ABC transporter periplasmic ligand-binding protein  52.16 
 
 
380 aa  394  1e-108  Burkholderia sp. 383  Bacteria  normal  normal  0.280778 
 
 
-
 
NC_007947  Mfla_0462  chain B, amide receptor of the amidase operon (Amic)  49.35 
 
 
388 aa  386  1e-106  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.564198 
 
 
-
 
NC_007005  Psyr_2206  regulatory protein, putative  50.42 
 
 
382 aa  353  2e-96  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.137264  normal 
 
 
-
 
NC_004578  PSPTO_2419  regulatory protein, putative  49.86 
 
 
382 aa  348  7e-95  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.816344  n/a   
 
 
-
 
NC_009485  BBta_1951  putative aliphatic amidase expression-regulating protein (amiC)  45.23 
 
 
388 aa  324  2e-87  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_4596  ABC-type branched-chain amino acid transport systems periplasmic component-like protein  45.08 
 
 
372 aa  303  3.0000000000000004e-81  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_011366  Rleg2_5692  putative amidase expression-regulating protein  40.98 
 
 
377 aa  299  7e-80  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0892365  normal 
 
 
-
 
NC_009485  BBta_2996  putative amidase expression-regulating protein  40.86 
 
 
391 aa  296  3e-79  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_012858  Rleg_6645  Extracellular ligand-binding receptor  40.44 
 
 
377 aa  295  8e-79  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.548908  normal  0.064075 
 
 
-
 
NC_007953  Bxe_C1305  branched chain amino acid ABC transporter periplasmic ligand-binding protein  41.73 
 
 
397 aa  291  1e-77  Burkholderia xenovorans LB400  Bacteria  normal  0.614657  normal 
 
 
-
 
NC_010515  Bcenmc03_5905  branched chain amino acid ABC transporter periplasmic ligand-binding protein  42.12 
 
 
391 aa  287  2e-76  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.607996  normal  0.0988317 
 
 
-
 
NC_010505  Mrad2831_4419  putative amidase expression-regulating protein  40.27 
 
 
384 aa  276  4e-73  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2143  ABC-type branched-chain amino acid transport systems periplasmic component-like protein  39.14 
 
 
385 aa  276  6e-73  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_0049  putative amidase expression-regulating protein  39.78 
 
 
380 aa  271  1e-71  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_1953  putative aliphatic amidase expression-regulating protein (amiC)  37.87 
 
 
410 aa  261  1e-68  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_1766  aliphatic amidase expression-regulating protein  40.05 
 
 
385 aa  256  4e-67  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_1289  putative substrate-binding component of ABC transporter  36.07 
 
 
436 aa  252  7e-66  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_1506  putative substrate-binding component of ABC transporter  35.54 
 
 
436 aa  250  3e-65  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_20580  aliphatic amidase expression-regulating protein  39.89 
 
 
385 aa  250  4e-65  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0172164  normal  0.861433 
 
 
-
 
NC_011004  Rpal_2661  putative aliphatic amidase expression-regulating protein, AmiC  36.86 
 
 
385 aa  239  5e-62  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.547475  n/a   
 
 
-
 
NC_009636  Smed_1755  putative regulator protein  39.3 
 
 
388 aa  238  1e-61  Sinorhizobium medicae WSM419  Bacteria  normal  0.348648  normal  0.0589242 
 
 
-
 
NC_013411  GYMC61_2778  urea ABC transporter, urea binding protein  35.26 
 
 
418 aa  237  2e-61  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009485  BBta_3200  putative aliphatic amidase expression-regulating protein, amiC  38.59 
 
 
386 aa  237  2e-61  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_0810  putative PAS/PAC sensor protein  39.06 
 
 
840 aa  236  7e-61  Cyanothece sp. PCC 7425  Bacteria  normal  0.643579  normal  0.828908 
 
 
-
 
NC_002977  MCA1662  ABC transporter, periplasmic binding protein, putative  34.48 
 
 
428 aa  231  2e-59  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_3324  putative aliphatic amidase expression-regulating protein, AmiC  39.19 
 
 
402 aa  230  3e-59  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_1823  extracellular ligand-binding receptor  33.96 
 
 
419 aa  229  8e-59  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.158541  n/a   
 
 
-
 
NC_008786  Veis_4910  extracellular ligand-binding receptor  34.25 
 
 
397 aa  228  1e-58  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.618157  normal  0.278899 
 
 
-
 
NC_009077  Mjls_2330  extracellular ligand-binding receptor  35.25 
 
 
421 aa  228  2e-58  Mycobacterium sp. JLS  Bacteria  normal  0.26288  normal  0.0264278 
 
 
-
 
NC_013739  Cwoe_3498  urea ABC transporter, urea binding protein  35.84 
 
 
419 aa  226  4e-58  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.0969064 
 
 
-
 
NC_011729  PCC7424_2862  urea ABC transporter, urea binding protein  35.69 
 
 
443 aa  225  8e-58  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_007925  RPC_3022  putative aliphatic amidase expression-regulating protein, AmiC  38.48 
 
 
384 aa  224  2e-57  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.486671 
 
 
-
 
NC_014151  Cfla_0700  urea ABC transporter, urea binding protein  33.96 
 
 
463 aa  224  2e-57  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0172324  hitchhiker  0.0000000649369 
 
 
-
 
NC_008146  Mmcs_2291  extracellular ligand-binding receptor  34.7 
 
 
421 aa  221  9.999999999999999e-57  Mycobacterium sp. MCS  Bacteria  normal  0.553297  n/a   
 
 
-
 
NC_008705  Mkms_2338  extracellular ligand-binding receptor  34.7 
 
 
421 aa  221  9.999999999999999e-57  Mycobacterium sp. KMS  Bacteria  normal  normal  0.267805 
 
 
-
 
NC_009338  Mflv_3798  extracellular ligand-binding receptor  34.52 
 
 
402 aa  219  5e-56  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_2596  extracellular ligand-binding receptor  34.13 
 
 
402 aa  219  7e-56  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.677611 
 
 
-
 
NC_008312  Tery_0130  extracellular ligand-binding receptor  33.88 
 
 
423 aa  219  8.999999999999998e-56  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.0243473 
 
 
-
 
NC_008255  CHU_1255  branched-chain amino acid ABC transporter, periplasmic protein  32.98 
 
 
445 aa  218  1e-55  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.857524 
 
 
-
 
NC_010172  Mext_1200  urea ABC transporter, urea binding protein  33.42 
 
 
413 aa  217  2e-55  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.12535 
 
 
-
 
NC_011757  Mchl_1360  urea ABC transporter, urea binding protein  33.42 
 
 
413 aa  217  2e-55  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.396806  normal 
 
 
-
 
NC_007413  Ava_4361  extracellular ligand-binding receptor  34.31 
 
 
438 aa  217  2.9999999999999998e-55  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.000367621  normal 
 
 
-
 
NC_013440  Hoch_5281  putative aliphatic amidase expression-regulating protein  33.24 
 
 
425 aa  216  7e-55  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_1674  urea ABC transporter, urea binding protein  34.52 
 
 
407 aa  214  9.999999999999999e-55  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_3780  putative aliphatic amidase expression-regulating protein  33.16 
 
 
404 aa  214  1.9999999999999998e-54  Shewanella woodyi ATCC 51908  Bacteria  normal  0.583472  hitchhiker  0.00053565 
 
 
-
 
NC_010725  Mpop_3572  ABC transporter substrate-binding protein  32.78 
 
 
422 aa  213  4.9999999999999996e-54  Methylobacterium populi BJ001  Bacteria  normal  0.536665  normal 
 
 
-
 
NC_011757  Mchl_3690  urea ABC transporter, urea binding protein  32.78 
 
 
417 aa  212  7.999999999999999e-54  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_1139  urea ABC transporter, urea binding protein  32.78 
 
 
413 aa  212  7.999999999999999e-54  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3381  ABC transporter substrate-binding protein  32.78 
 
 
417 aa  212  7.999999999999999e-54  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_3240  urea ABC transporter, urea binding protein  31.4 
 
 
405 aa  209  1e-52  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.00360419  n/a   
 
 
-
 
NC_007614  Nmul_A1557  ABC transporter, periplasmic binding protein, putative  33.76 
 
 
441 aa  208  1e-52  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_1775  twin-arginine translocation pathway signal  32.32 
 
 
414 aa  208  1e-52  Methylobacillus flagellatus KT  Bacteria  normal  0.185236  normal 
 
 
-
 
NC_011884  Cyan7425_2260  urea ABC transporter, urea binding protein  33.6 
 
 
440 aa  208  1e-52  Cyanothece sp. PCC 7425  Bacteria  normal  0.411735  normal 
 
 
-
 
NC_010510  Mrad2831_6186  urea ABC transporter, urea binding protein  33.33 
 
 
410 aa  207  3e-52  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.411723  normal  0.830735 
 
 
-
 
NC_004578  PSPTO_2418  branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein  32.78 
 
 
393 aa  206  7e-52  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_1687  extracellular ligand-binding receptor  32.78 
 
 
413 aa  206  7e-52  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2205  extracellular ligand-binding receptor  32.5 
 
 
393 aa  204  1e-51  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.327939  normal 
 
 
-
 
NC_007958  RPD_4295  putative aliphatic amidase expression-regulating protein, AmiC  33.61 
 
 
388 aa  204  2e-51  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0107993 
 
 
-
 
NC_007973  Rmet_0952  twin-arginine translocation pathway signal  33.24 
 
 
419 aa  203  3e-51  Cupriavidus metallidurans CH34  Bacteria  normal  0.553309  normal  0.40345 
 
 
-
 
NC_007347  Reut_A0986  twin-arginine translocation pathway signal  33.33 
 
 
418 aa  203  4e-51  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3881  putative aliphatic amidase expression-regulating protein  33.33 
 
 
411 aa  203  4e-51  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_4898  urea ABC transporter, urea binding protein  33.51 
 
 
421 aa  202  7e-51  Pseudomonas putida GB-1  Bacteria  normal  normal  0.0308389 
 
 
-
 
NC_002947  PP_4841  branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, putative  33.24 
 
 
421 aa  202  9.999999999999999e-51  Pseudomonas putida KT2440  Bacteria  normal  normal  0.365474 
 
 
-
 
NC_007005  Psyr_4426  branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein  33.16 
 
 
421 aa  202  9.999999999999999e-51  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.171999 
 
 
-
 
NC_009512  Pput_4719  ABC-type branched-chain amino acid transport systems periplasmic component-like protein  33.16 
 
 
421 aa  202  9.999999999999999e-51  Pseudomonas putida F1  Bacteria  normal  0.14369  normal  0.0383938 
 
 
-
 
NC_007969  Pcryo_0994  branched-chain amino acid ABC transporter periplasmic substrate-binding protein  32.44 
 
 
454 aa  202  9.999999999999999e-51  Psychrobacter cryohalolentis K5  Bacteria  normal  0.603537  normal 
 
 
-
 
NC_010505  Mrad2831_5512  ABC transporter substrate-binding protein  32.43 
 
 
422 aa  201  1.9999999999999998e-50  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.115941  normal  0.320522 
 
 
-
 
NC_010501  PputW619_4633  urea ABC transporter, urea binding protein  33.51 
 
 
421 aa  201  1.9999999999999998e-50  Pseudomonas putida W619  Bacteria  normal  0.688874  normal  0.0837107 
 
 
-
 
NC_008463  PA14_64270  hypothetical protein  33.95 
 
 
421 aa  201  1.9999999999999998e-50  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  decreased coverage  0.00916173  normal 
 
 
-
 
NC_009656  PSPA7_5579  hypothetical protein  33.42 
 
 
421 aa  199  7e-50  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_0593  urea ABC transporter, urea binding protein  31.06 
 
 
418 aa  199  7.999999999999999e-50  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0692994 
 
 
-
 
NC_009439  Pmen_0701  ABC-type branched-chain amino acid transport systems periplasmic component-like protein  32.98 
 
 
421 aa  199  9e-50  Pseudomonas mendocina ymp  Bacteria  normal  0.525993  normal 
 
 
-
 
NC_010515  Bcenmc03_5668  branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein  32.87 
 
 
424 aa  198  1.0000000000000001e-49  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.851164  normal 
 
 
-
 
NC_007516  Syncc9605_2620  putative urea ABC transporter, substrate binding protein  34.13 
 
 
432 aa  198  1.0000000000000001e-49  Synechococcus sp. CC9605  Bacteria  normal  0.0558299  normal  0.886918 
 
 
-
 
NC_007958  RPD_3864  amide-urea binding protein  31.88 
 
 
420 aa  197  2.0000000000000003e-49  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.601855  normal 
 
 
-
 
NC_011004  Rpal_1443  urea ABC transporter, urea binding protein  31.34 
 
 
420 aa  197  3e-49  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1252  amide-urea binding protein  32.15 
 
 
392 aa  197  3e-49  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0854371  normal  0.451875 
 
 
-
 
NC_010681  Bphyt_0954  urea ABC transporter, urea binding protein  32.98 
 
 
431 aa  197  3e-49  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_4885  branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein  32.63 
 
 
421 aa  196  4.0000000000000005e-49  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008061  Bcen_3732  branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein  32.6 
 
 
424 aa  196  4.0000000000000005e-49  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_4636  branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein  32.6 
 
 
424 aa  196  4.0000000000000005e-49  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_0220  urea ABC transporter, urea binding protein  31.59 
 
 
421 aa  196  5.000000000000001e-49  Delftia acidovorans SPH-1  Bacteria  normal  0.618006  normal 
 
 
-
 
NC_009485  BBta_0654  branched chain amino-acid ABC transporter substrate-binding protein  31 
 
 
391 aa  196  5.000000000000001e-49  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.379667 
 
 
-
 
NC_011666  Msil_2007  urea ABC transporter, urea binding protein  32.51 
 
 
405 aa  196  6e-49  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_008740  Maqu_3867  extracellular ligand-binding receptor  32.07 
 
 
421 aa  196  6e-49  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_2251  urea ABC transporter, urea binding protein  33.42 
 
 
433 aa  196  8.000000000000001e-49  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A3683  branched chain amino acid ABC transporter periplasmic ligand-binding protein  32.63 
 
 
432 aa  195  1e-48  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.277595 
 
 
-
 
NC_010682  Rpic_2193  urea ABC transporter, urea binding protein  32.44 
 
 
418 aa  194  2e-48  Ralstonia pickettii 12J  Bacteria  normal  normal  0.200796 
 
 
-
 
NC_008340  Mlg_0188  branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, putative  32.75 
 
 
444 aa  194  2e-48  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_008785  BMASAVP1_A0732  putative amino acid ABC transporter, periplasmic amino acid-binding protein  31.5 
 
 
435 aa  194  3e-48  Burkholderia mallei SAVP1  Bacteria  normal  0.909457  n/a   
 
 
-
 
NC_006348  BMA2176  branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding protein, putative  31.5 
 
 
435 aa  194  3e-48  Burkholderia mallei ATCC 23344  Bacteria  normal  0.253407  n/a   
 
 
-
 
NC_008836  BMA10229_A2565  putative amino acid ABC transporter, periplasmic amino acid-binding protein  31.5 
 
 
435 aa  194  3e-48  Burkholderia mallei NCTC 10229  Bacteria  decreased coverage  0.000125255  n/a   
 
 
-
 
NC_007510  Bcep18194_A4014  branched chain amino acid ABC transporter periplasmic ligand-binding protein  31.91 
 
 
435 aa  194  3e-48  Burkholderia sp. 383  Bacteria  normal  0.0416471  normal  0.65931 
 
 
-
 
NC_009080  BMA10247_2048  putative amino acid ABC transporter, periplasmic amino acid-binding protein  31.5 
 
 
435 aa  194  3e-48  Burkholderia mallei NCTC 10247  Bacteria  normal  0.0410415  n/a   
 
 
-
 
NC_012856  Rpic12D_1870  urea ABC transporter, urea binding protein  32.44 
 
 
418 aa  193  4e-48  Ralstonia pickettii 12D  Bacteria  normal  0.510403  normal  0.303887 
 
 
-
 
NC_009074  BURPS668_3067  putative amino acid ABC transporter, periplasmic amino acid-binding protein  31.23 
 
 
435 aa  193  5e-48  Burkholderia pseudomallei 668  Bacteria  normal  0.656729  n/a   
 
 
-
 
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