Gene Dd703_0479 details

Gene Information

• Locus tag: Dd703_0479
• ID: 8088803
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya dadantii Ech703
• Kingdom: Bacteria
• Replicon accession: NC_012880
• Strand: +
• Start bp: 524217
• End bp: 526322
• Gene Length: 2106 bp
• Protein Length: 701 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 644834549
• Product: peptidase M50
• Protein accession: YP_002986112
• Protein GI: 242237931
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0845] Membrane-fusion protein

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGAAT TCCTGCCGGC GCTGCGGGCC GATCTGCAAC TGGTGGCGTC GGCCGCAGGG 
CTGGATGGCG CGCCCCAATG GGTATTGTCC GACCCGGCGA CCGGGCGTTA CTTCACGCTG 
ACGCCTTCGG CGATTCGCCT GTTGCGGCAC TGGTCGTTGC GGGAGCTTCA GTCGGTACTG 
GCGGCCGCCA ATACCGAGCC GGGCCTGCTG TTGCAGCGTA GCGATCTGGA ACAATTGCTG 
CGCTTCCTGC GTAATCACGA TCTGATCGCC GCCAGCGATC CGGTTCAACG GCAAGCGTAT 
GCCATCAAAG CGGGGGCGAT GCGGACTAGC CTGTGGAAGT CCCTGCTGCA CCAATATCTG 
TTTTTTCGTA TTCCGTTGTG GCGCCCTGAC CCGTGGCTGA GCCGCTGCTG GCCTGGGTTA 
CAGCGTTATG GCCGGCCTTT TTTGCGCGTC GGGTTGCCGC TGATTCTACT GCTGGGCGGG 
TTTCTGGTGA GCCGGGATTG GGTGCGTTAT ACCCATGCGT TCCCCCATTT GTTCAGCCTG 
CAAGGCATGG CGACTTTTGG CGTCGCGTTG TTCTGCGCCA AGTTTGTGCA CGAACTGGGG 
CACGCTTTTA TGGCCAAACG CGCGGGGTGC CGGGTTCAAA ACATGGGGGT GGCGTTTATC 
GTGCTGTTTC CGTTGTTCTA TACCGACGTG AGCGATGCCT GGAAACTGAA GGATCATCGC 
GCCCGGTTGC TGATCAGCGC CGGCGGCATT CTGGCGGAAC TGCTGCTGGC CGGTATCGCG 
CTGCTGGTAT GGGCGTTATT GCCTGACGGC CCGGTGCGCA GCGCCGTTTT TATGCTCTCC 
AGTGCGACCT GGATAACGAC GCTGGTCGTC AATCTTAATC CCTTGATGAG GTTCGACGGT 
TATTTCCTGC TGAGCGATTT CTGGCGGGTG GAAAACCTGC AGGAACGCGC TTATGCCTTG 
TGTCGCTGGC GGTTGCGCGA AGCGTTGTTC GGTTACGGCC GGCCGGCGCC GCAAACCTGG 
TCGCCCGCTA TGCAGCGCAA GTTGCTGATC TGGGGTTACG CCTCGTGGGT GTGGCGCTTT 
TTCCTGTTCA CCGGTATCGC GCTGGTGGTG TATCACTTTT TCATCAAGCT GGTCGGCATT 
GGCCTGATGC TGGTTGAAAT CGGCTGGTTT GTGGCGCTGC CGATCGTTAA GGAGATGTCG 
GTATGGTGGT CTATGCGTAA TGCGGCACAC CCCGCCAACC TGCTGAGGTC TGTCCTGGCA 
GGGGCGCTGA TCCTGATATT CCTGCTGTTT CCATGGCGCG GCAGCATTCG CATTCCGGCA 
GTGCTGGAGG CGGAAAATGT CAGCGTGCTG TATGCGCCTA TTCCGGCACA GGTTAAGGCG 
CTGCATGTGG TTGATGGTCA GAGCGTGAAA GCGGGCGATG TGCTGCTGGA GCTGACCTCT 
GCGGATGTGG ATTATCGCAT TGCGATTGAG CGCCTACAGA TCGCTGTGTT GCAACAGCGG 
TTGCAGCGAG GGGCGGCACG TCAGGAAACC GCCAGTGAAA CCCAGGTGAT TGACCGGCAA 
CTGGCGGAAT CGCTGGCGCG CTATCGAGGG TTGGTGGCGC AACAACAACG GTTGTCGATC 
GTCGCGCCGC AGGCCGGGCT GGTGAGGGAT GTGACACGGG ATATGACGGC AGGCCGCTGG 
CTGACGGCGG ATATGCCGTT GTTGCGGGTG GTCGACGCGG GCGCAGGGCG AGTGCAGGGA 
TATTTGCCGG AGGATGCGCT GAAACGAGCC CAGACGGGCG CGCAAGGCAC GTTTATCGCC 
GATGAACCGG CGTATCCTCG CCTGACGGTG CGACTGAACG ATATCGCGCC CACCGGCGTT 
GCTTACCTGC AACGGGAAAT GCTGGCGTCC GATCGTCATG GCCCTATCGC TGTGCGCCGC 
GACCGGGATC ACAACCCTCT GCCGGTTCAG GCGCAGTACA GCATACGTTT TCGGGTGGAG 
GATGATCGGC TGCTGCCGCC ACAACCTTTG CGGGGCAGCG TCATTCTGGA AGGGGATAAG 
GAATCTATTC TTGGTGCAGT GTGGCGTCGG GTGGCGGCGC TGGGCATTCG GGAAAGTGGG 
TTTTGA 

 

Protein sequence

MSEFLPALRA DLQLVASAAG LDGAPQWVLS DPATGRYFTL TPSAIRLLRH WSLRELQSVL 
AAANTEPGLL LQRSDLEQLL RFLRNHDLIA ASDPVQRQAY AIKAGAMRTS LWKSLLHQYL 
FFRIPLWRPD PWLSRCWPGL QRYGRPFLRV GLPLILLLGG FLVSRDWVRY THAFPHLFSL 
QGMATFGVAL FCAKFVHELG HAFMAKRAGC RVQNMGVAFI VLFPLFYTDV SDAWKLKDHR 
ARLLISAGGI LAELLLAGIA LLVWALLPDG PVRSAVFMLS SATWITTLVV NLNPLMRFDG 
YFLLSDFWRV ENLQERAYAL CRWRLREALF GYGRPAPQTW SPAMQRKLLI WGYASWVWRF 
FLFTGIALVV YHFFIKLVGI GLMLVEIGWF VALPIVKEMS VWWSMRNAAH PANLLRSVLA 
GALILIFLLF PWRGSIRIPA VLEAENVSVL YAPIPAQVKA LHVVDGQSVK AGDVLLELTS 
ADVDYRIAIE RLQIAVLQQR LQRGAARQET ASETQVIDRQ LAESLARYRG LVAQQQRLSI 
VAPQAGLVRD VTRDMTAGRW LTADMPLLRV VDAGAGRVQG YLPEDALKRA QTGAQGTFIA 
DEPAYPRLTV RLNDIAPTGV AYLQREMLAS DRHGPIAVRR DRDHNPLPVQ AQYSIRFRVE 
DDRLLPPQPL RGSVILEGDK ESILGAVWRR VAALGIRESG F