Gene Dd703_0345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_0345 
Symbol 
ID8088580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp394472 
End bp395626 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content55% 
IMG OID644834411 
ProductMandelate racemase/muconate lactonizing protein 
Protein accessionYP_002985982 
Protein GI242237801 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAATAG AATCTATTGA TGTCACCGTC TTCACCTATC CTACACGTCG GGTTTCTGAT 
AGCGCTGGGC ATTCTCATCC AGGCGATGAA CACCAGGCAT CTATGGCGTT GCTGACCATT
ACGGCAGATG AGGGCAGCAA AGGGTATGCG TTTTCACCGG TGGAAGTTGT CCGGCCTTAC
GTCGTGAATG CATTTTTCCG TAAAGTGTTG ATTGGGCAGG ATCCTTTCCA GCGTGAACGC
CTCTGGCAGG ATCTGGTGCA CTGGCAGCGC GGCAGCGCGC ATCAACTGAC GGATCGGGCG
TTGGCGATTG TCGAACAGGC ATTGTGGGAT CTGATTGGCC GTAAACTGAA TGTCCCGGTT
TATCAATTAT TGGGAGGGTA TCGCGACAAG GTTCCCGCCT ATGGCAGCAC CATGTGCGGC
GATGAACTGT CTGGAGGGCT GTCGACGCCG GAAGAGTATG GGTTGTTTGC TGAAAAACTG
GTACAGCGCG GCTATAAAGC CATCAAGCTG CACACCTGGA TGCCGCCGGT TTCTTTCGCG
CCCAGCCCGA AAATGGACGT CAAAGCTTGC GCCGCCGTGC GCGAAGCGGT CGGGCCTGAT
ATCTGCCTGA TGCTGGATGG ATATCACTGG TATAGCCGCA GCGATGCGCT CTATATCGGC
CGGGAGTTGC AGAAGCTGAA CTTCACCTGG TTTGAAGAGC CGATGGAGGA GCAAAGCATG
GCTTCCTACA GTTGGCTCAG CAAAAACCTT GAGATTGACG TGATTGGGCC GGAAAGCCTG
GGCGGCAAAT ACTTCAGCCG CGCCGACTGG GTGAAGGAAG GCGCCTGCGA TATCTTACGT
GCCGGCGTGC AGGGCGTTGG CGGGATAGCT CCCTGTGTGA AAGTGGCGCA TCTGGCGGAG
TCTTTCGGGA TGGACTGCGA AATTCATGGC AACGGCGCGG CGAACCTGGC GGTGGTCGGT
GCGATCAAAA ATTGCCGCTG GTACGAACGT GGTCTGCTGC ATCCATTCCT GAACTATGAC
GAGCCGGCCG CATACCTGAA CGCGCTGGTT GATCCGATGG ATGAAAATGG GTTTGTTCAT
TTGCCGCAAG CCCCTGGTTT AGGTGAAGAC ATCAACTTCG CGTGGATTGA CGCTCATACC
ATAAGCAAAG CATGA
 
Protein sequence
MKIESIDVTV FTYPTRRVSD SAGHSHPGDE HQASMALLTI TADEGSKGYA FSPVEVVRPY 
VVNAFFRKVL IGQDPFQRER LWQDLVHWQR GSAHQLTDRA LAIVEQALWD LIGRKLNVPV
YQLLGGYRDK VPAYGSTMCG DELSGGLSTP EEYGLFAEKL VQRGYKAIKL HTWMPPVSFA
PSPKMDVKAC AAVREAVGPD ICLMLDGYHW YSRSDALYIG RELQKLNFTW FEEPMEEQSM
ASYSWLSKNL EIDVIGPESL GGKYFSRADW VKEGACDILR AGVQGVGGIA PCVKVAHLAE
SFGMDCEIHG NGAANLAVVG AIKNCRWYER GLLHPFLNYD EPAAYLNALV DPMDENGFVH
LPQAPGLGED INFAWIDAHT ISKA