Gene Dd703_0296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_0296 
Symbol 
ID8088531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp338771 
End bp339874 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content61% 
IMG OID644834364 
ProductABC transporter periplasmic solute-binding protein 
Protein accessionYP_002985935 
Protein GI242237754 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1840] ABC-type Fe3+ transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.674577 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCGCA CTACCATCGC CAGTCTGGCG CTGCTCGCCG CCGGCACTGT CGGCGCTTCG 
GCCGCCGAAC CGTTTGACGT CTCATCGCTG GTCGCCGCCG CACGCCAGGA AGCGCCGATC
ACCGTCTACG CCTCCACCGG CAAAATCGTC CAGCAGGCCA AGGCGTTCAG CGAACGGTAT
GGCGTCAACG CGGTCGGTAT TAAAGCCGAC GCACCGCAGA TTATCGAGAT CCTAAGCCGT
GAAGCGCTGG CGCATAACGT CAAAGCGGAC GTCGCCATCG TCGAAGACGC GCCGGCCGGC
ATCGAACAGC TACTGAGCAA AGGCTATGTT CAAAGCTGGG TGCCCACTGA CCTGAAAACC
ACCATTCCGG CCAACTATCA GGATCCGCTC ACCGTGGTGC TGGCGCCGAA CGTGTTCGCC
TATAACACCA CGCACCACGA CGCCTGCCCC ATTACCAATA TCTGGCAACT GACCGAACCG
CAGTGGCGCG GCAAAGTGGC GCTGCAAGAC CCGACCGGCA AACCGGCTTA CACCGACTGG
TTCAGCCAGT TGGCCACCCA CTACGACCAG CCGATGCGCG AGGCATACCA GCAGCAATAC
GGCAAACCAT TACCCGCCAG CGAACATTCG GCGACAGAGG CTTTCGTGAA AGCGCTGGCG
GCCAACAGCC CGCTGCTGAC GCACTCCGAC AACGATGCCG CCGAAGCGGT CGGCGCGCCG
GACGGCAAAG GCGATTTCGT CGGTTTGGTC TCCACCGCGA AATTCCGCGA CAACCAGCAG
GGCATGAAGC TGGGATTGTG TCACGGCATG AAACCGGTGA TTGGCTGGAA CTACCCGAGC
CTGGGCGTCA TTGCCGCCGG TAGCCGCAGC CCGAACGCCG CGAAGTTGTT CATTCGTTAT
CTGATGACCG CCGAAGGCAT CGCGCCGCAG GGCGTGGACG GCAAGATGTC CACCAATCAG
ACGGTAGCGC TGCCGGCGAA CGAACCCTCC GGTATTGAAA AATACCGTGA TGAACTGATG
GCGTATCAAA CGTCCAGCGC CAAAACCGAC TGGCAAACCC GCCAGGACTG GCAAGACCTG
TGGAACCTGA ACTACCGTAA ATAA
 
Protein sequence
MNRTTIASLA LLAAGTVGAS AAEPFDVSSL VAAARQEAPI TVYASTGKIV QQAKAFSERY 
GVNAVGIKAD APQIIEILSR EALAHNVKAD VAIVEDAPAG IEQLLSKGYV QSWVPTDLKT
TIPANYQDPL TVVLAPNVFA YNTTHHDACP ITNIWQLTEP QWRGKVALQD PTGKPAYTDW
FSQLATHYDQ PMREAYQQQY GKPLPASEHS ATEAFVKALA ANSPLLTHSD NDAAEAVGAP
DGKGDFVGLV STAKFRDNQQ GMKLGLCHGM KPVIGWNYPS LGVIAAGSRS PNAAKLFIRY
LMTAEGIAPQ GVDGKMSTNQ TVALPANEPS GIEKYRDELM AYQTSSAKTD WQTRQDWQDL
WNLNYRK