Gene Dd703_0270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_0270 
Symbol 
ID8088505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp305880 
End bp306941 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content61% 
IMG OID644834338 
Productbeta-lactamase domain protein 
Protein accessionYP_002985909 
Protein GI242237728 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAACCC TGATCGCCGT CAGCGGAGTA GGGGGAAAAA GTCCCGCCGC ATTCATGGTA 
GAAGTCGACG GCTTCCGTTT AATGTTGGAT CTGGGAGAGG GACCGCGGCC AGGGCAGCTT
CCCGATATCG GTGAATTACC TCCGCCGGAC GCCATCTGTC TGAGCCATGC GCATATCGAT
CACTGCGGCG GCCTGATACT GCGCGAAGCG TGGGGTTATC CGCCGGTGTA CGCCACCGAG
CGGGTCTGGC GGCAAATTCC AGCGACATGG GTAGCCGAGG AGGATCGCCG TATCCTGCCG
GAACACGGCC GCTGTGAAAT CGGGCCGGTG TTGATGATCA CCGGGCGTAG CGGTCACTCC
CCCGGCGGTA TCTGGATGCA TGTCGTCGCG GGCGGCGGCC TGACCTACAC CGGCGACTGG
AGCACCGAAT CCTCGCTGTT TCCGTTCGAC CTGCCGCCGG AAGCCGCATT GCTGATTACG
GATGCCTCCT ACGGCGACCG CGCCCAGTCA CTGGCGGAAC AAAAAGCCAT CATGCTACAG
GCATGCCGCG ACGGCGCGCT GATCGGCGTT CCCGGCTGGG GACGCGCGCC GGATATGGCG
CTCTACCTGA TGGAATACGG CGTCGTGCCG CGTCTGTGTT CACAGGTTCA GCAGGAAATC
AAACTGCTCA TCGACAGCCA AATCCCCTAC CTGCGACAGT ACCTTCATCA CCTGCTGTCG
CACCAAAGCG CCCGGCCCTA CCGCCCGGAC GACGTGATCA TCTGTAGCGA CGGCACCGCC
AGCAGCGGGC TATCCGCCGC GCTACGCTCC CAGGCTGATC GCTTCCATTT CATCTTCAGC
GGGCAAATTC CCTATAGCTC GCCCGCCATG ATGATGCTAC AAGCCGGGCG AGCGCGCTGG
CTACCGTGGA ATGTGCATCC CCGTTTGTCG GATCAGTTGA TGCTGGCGAA TCTGACCCAT
GCGCAAACCG TCATCCCGGC ATTTATCGAA CCCCATAATG CATCGCAAAT CGAAGAACAA
CTGGCAGGTA GGGTCAGCTG GCAAACCGAA CATGTATTTT GA
 
Protein sequence
MPTLIAVSGV GGKSPAAFMV EVDGFRLMLD LGEGPRPGQL PDIGELPPPD AICLSHAHID 
HCGGLILREA WGYPPVYATE RVWRQIPATW VAEEDRRILP EHGRCEIGPV LMITGRSGHS
PGGIWMHVVA GGGLTYTGDW STESSLFPFD LPPEAALLIT DASYGDRAQS LAEQKAIMLQ
ACRDGALIGV PGWGRAPDMA LYLMEYGVVP RLCSQVQQEI KLLIDSQIPY LRQYLHHLLS
HQSARPYRPD DVIICSDGTA SSGLSAALRS QADRFHFIFS GQIPYSSPAM MMLQAGRARW
LPWNVHPRLS DQLMLANLTH AQTVIPAFIE PHNASQIEEQ LAGRVSWQTE HVF