| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_4109 |
|---|
| Symbol | |
|---|
| ID | 8120961 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 4637693 |
|---|
| End bp | 4638976 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644854484 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003006384 |
|---|
| Protein GI | 251791663 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGAAG ACCGGCAGAT AACATTCGAT GCTTTTTCGC ATCAGTTGAC CAATATAAAT
ATCTGGTCCT GTGACGGTAA TTGGTTGATT TATGATGTCA GGCCGCACGG ATCTTCGTTT
ACCGGTTTGA CGATTGAACG CGTTAATGTG GAAACCCACC GGCGTGAGGT GATTTACCGT
GCCGGGCAGG GGGCGCATGT CGGCGTGGCG ACCGGTAGCC CGGTGCCGCC GCAGCGCTAT
GTGTTTATCC ACGGCCCTGA AAACCCGGAC GTGCACTGGC AGTACGATTT CCACCATCGT
CGAGGCGTGG TGCTGGCGGA TGATGACCAC CGGCAGGCGA CGACGCTGGA TGCCTGCGTG
TTGACGGCAC CGTATCTGGC CGGTGCGTTG CGTGGGGGTT CTCATGTGCA TGTGTTCAGC
CCGGACGGCA CCCGCCTGAG CTTTACCTAT AACGACCATG TGCTGCACGA GCGCGACCCG
GCGCTGGACT TGCGCAACGT CGGGGTGGCG GTGCCGTTGC ATACAGTGGC GGCGCCACAC
CGCCATCCGC GTGAGCACGA TGGCAGCCAT TTTTGCGTCT TGGTAAGCTA CACCACGCCG
CAGCCGCGCC CCGGCAGCGA TGATATCAAC CGCGCCTATG AGGAAGGTTG GGTAGGAAAT
ACCGGCTATT TACGCTCGGA CGGTTGTCGC CAGCGCTGGG CGCTGGCGTT TATCGGCGAT
ACGTTGTCGG CGCGCGGCGA AAAAGTGCCG GAGGTGTTTC TCGTTGATTT ACCGGAAAAA
ATGGATGATT ACGCCCGTGC CGGCGAGCAG CCGCTAGGCG GCACCGAAAC AGAACTGCCT
GCGCCGCCTG CCGGCGTGCG TCAGCGCCGG CTCACCTTCA CCGCCGATAG GCCGTATCCC
GGCGTGGTTA ACCAGCCGCG TCACTGGTTA CGCAGTTCGC CGGACGGCAG CCAAATCGCC
TTTCTGATGA AAGACGATCG CGGTGTCGTG CAACTGTGGA TGGTATCGCC GAACGGCGGT
GAACCACGTC AGGCGACGCA GGGCGACTGG CCGGTGCAAT CGGCATTTAG CTGGCATCCG
GACGGCGAAT ACCTGGCGTT CATTGGCGAC AACAGCGTGA TGCTGTGCGA GGCGGCGACC
GGCCGGTTGA CTCGTCAGAC CGCACGCAGC GAAACGCCGC CGGTAGCGGA TGCGGTGGTA
TTTTCACCGA ATGGCGATCG CATCGCCTAT TTGCGTGAAA TCGACGGTTG CAACCAGATT
TTTGTGGTAA CGGTGAGTTA CTGA
|
|---|
| Protein sequence | MNEDRQITFD AFSHQLTNIN IWSCDGNWLI YDVRPHGSSF TGLTIERVNV ETHRREVIYR
AGQGAHVGVA TGSPVPPQRY VFIHGPENPD VHWQYDFHHR RGVVLADDDH RQATTLDACV
LTAPYLAGAL RGGSHVHVFS PDGTRLSFTY NDHVLHERDP ALDLRNVGVA VPLHTVAAPH
RHPREHDGSH FCVLVSYTTP QPRPGSDDIN RAYEEGWVGN TGYLRSDGCR QRWALAFIGD
TLSARGEKVP EVFLVDLPEK MDDYARAGEQ PLGGTETELP APPAGVRQRR LTFTADRPYP
GVVNQPRHWL RSSPDGSQIA FLMKDDRGVV QLWMVSPNGG EPRQATQGDW PVQSAFSWHP
DGEYLAFIGD NSVMLCEAAT GRLTRQTARS ETPPVADAVV FSPNGDRIAY LREIDGCNQI
FVVTVSY
|
|---|
| |