Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_3762 |
Symbol | |
ID | 8117194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 4255140 |
End bp | 4256333 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644854129 |
Product | cystathionine beta-lyase |
Protein accession | YP_003006041 |
Protein GI | 251791320 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGAGTA AAAAAATCGC CACCGCGCTG GTGGCCGCCG GACGCACTAA GCGGGTAACC CAAGGCGCGG TAAACCCGGT AATCCAGCGC GCTTCTTCGC TGATCTTCGA CAGCGTGCAG GATAAAAAAC ACGCCACCGC CAATCGCGCT AAAGGCGCGT TGTTTTATGG CCGCCGCGGT ACGCTGACCC ATTTCGCTTT TCAGGACGCG ATGACCGAGC TGGAAGGCGG TGCGGGTTGC GCACTCTATC CTTGCGGCGC AGCCGCCATC GCCAACGCGA TAACGTCATT TGTTTCGGCG GGCGACCATC TGCTGGTTAC CGGTTCCGCT TATGAACCGA CGCAGGATTT TTGTAACAAA GTGCTGACTA AAATGAACAT CAGCACTACC TTTTTCGACC CGATGATCGG TGCCGATATC GCCACGCTTA TCCAGCCCAA TACCCGGGTC GTGTTTTTGG AATCACCCGG TTCCATTACG ATGGAAGTGC ATGACGTGCC GGCGATGGTC GCGGCCATCC GTCGCGTTAA TCCGGACATC GTCATCATGA TCGACAACAC CTGGGCTGCC GGCGTGTTGT TCCGCCCGCT TGATGTCGGC GTCGATATTT CGATCCAATC CGGCACCAAA TACATCGTCG GCCACTCCGA CGCCATGATT GGCACCGCCG TCGCCAACGC ACGCTGTTGG GATCAACTGC GTGAACAATC CTACCTGATG GGGCAGATGG CTGACGCAGA TAGCGCCTAT CTGGCCAGCC GCGGCCTGCG AACGCTCGGC GTCAGATTGC AACAGCATCA GGAGAATGGC CTGCGCGTTG CACGCTGGCT GGCGGCCCGC CCGGAAGTCG CGACGGTGAA CCACCCGGCG CTGCCCGGCA GCAAAGGACA TGAATTCTTC GTCCGGGATT TCAGCGGCAG TAATGGCCTG TTCTCATTTG TCCTGAAAGA GAAACTGAGC CGTGAACAAC TGGCCCATTA TCTCGACCAC TTCAGCCACT TCCGTATGGC CTACTCCTGG GGGGGGTTCG AATCGCTGAT TTTGGCGAAC CAACCGGAGG AACTGGCGGC GATTCGCCCG GCCGGCGGCA TCGACTTTAC CGGCACGCTG GTGCGACTGC ATATCGGCCT GGAAGATTGC GACGATCTGG AAGCCGATTT GGAAGCCGGC TTCAGGAGAT TGCAGGAAAT GTGA
|
Protein sequence | MTSKKIATAL VAAGRTKRVT QGAVNPVIQR ASSLIFDSVQ DKKHATANRA KGALFYGRRG TLTHFAFQDA MTELEGGAGC ALYPCGAAAI ANAITSFVSA GDHLLVTGSA YEPTQDFCNK VLTKMNISTT FFDPMIGADI ATLIQPNTRV VFLESPGSIT MEVHDVPAMV AAIRRVNPDI VIMIDNTWAA GVLFRPLDVG VDISIQSGTK YIVGHSDAMI GTAVANARCW DQLREQSYLM GQMADADSAY LASRGLRTLG VRLQQHQENG LRVARWLAAR PEVATVNHPA LPGSKGHEFF VRDFSGSNGL FSFVLKEKLS REQLAHYLDH FSHFRMAYSW GGFESLILAN QPEELAAIRP AGGIDFTGTL VRLHIGLEDC DDLEADLEAG FRRLQEM
|
| |