Gene Dd1591_3216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_3216 
Symbol 
ID8120844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand- 
Start bp3658336 
End bp3659010 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content59% 
IMG OID644853595 
ProductHelix-turn-helix type 11 domain protein 
Protein accessionYP_003005516 
Protein GI251790795 
COG category[K] Transcription 
COG ID[COG2378] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCGCGCA GCCACCGGTT ATTCGAGCTG ATGCAGGCAC TTCGCCGACA CCGGGGAACA 
GTGTCCGGCG AAGTATTGGC GCGGGAAAGC GGTGTGTCGT TGCGCACTAT TCGCCGTGAT 
ATCGCTACGC TACAAACTAT GGGAGCCGAT ATCGACGGTG CCCCCGGCGT GGGTTATATC 
CTGCGCCCCG GTTTCCTTCT GCCGCCGCTG TCTTTCACGG AAGAAGAGTT ACAGGCACTG 
GTGGCGGGGG CGCAATGGGT CAGCCGCCAG ACTGACGACG CCTTGGCGTT GGCCGCGCAG 
AACGCGCTGG CTAAAATCGG CGGCGTGTTG AATCCCGAGA TGAGACGCGT GCTGGATGAT 
GATGCGCTCT ATGTCGGCCG CCAAAAGGAG ATGACCTCGA GCCTTGACCT GGCGCTGGTG 
CGGCAGGCTA TGCGAGGACA ACGCAAGATG CGCATTACGT ACACCGATCA GCATGGTAAG 
GCGTCGGAAC GTGTCATTTG GCCGATCGTC TTAGGCTTTG TGGAATCCCG CCGTTTTATC 
GCCGGCTGGT GTGAACTGCG TGGCGATTTC CGCCTTTTTC GCGTTGACCG TATTACCCAG 
GCTGAATTCC TGAAAGATCG CTACTCGGGC AGCCGCCGAC AACTCGTTAA GGCGTGGCGA 
GCGCAAAATA AGTAG
 
Protein sequence
MSRSHRLFEL MQALRRHRGT VSGEVLARES GVSLRTIRRD IATLQTMGAD IDGAPGVGYI 
LRPGFLLPPL SFTEEELQAL VAGAQWVSRQ TDDALALAAQ NALAKIGGVL NPEMRRVLDD 
DALYVGRQKE MTSSLDLALV RQAMRGQRKM RITYTDQHGK ASERVIWPIV LGFVESRRFI 
AGWCELRGDF RLFRVDRITQ AEFLKDRYSG SRRQLVKAWR AQNK