| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3180 |
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| Symbol | |
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| ID | 8121045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 3621991 |
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| End bp | 3623196 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644853557 |
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| Product | cysteine sulfinate desulfinase |
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| Protein accession | YP_003005481 |
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| Protein GI | 251790760 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily
[TIGR03392] cysteine desulfurase, catalytic subunit CsdA |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCGT TTAACGCCCC GGACTTTCGC CGGCAATTTC CCGCACTTCG TCAGCCCGGT
GTTTATCTCG ATAGCGCCGC GACGGCGCTA AAACCCGAAG CCGTCATCGC AGCGGTTCAG
CACTGTTATG CCAGCGAAAC GGGTAATGTA CATCGCAGCC AGCATCGCGC CGCCCGGCAG
TTGTCGGAAG CGTTCGAGCT GGCGCGTGAA AAAGTCGCGA AATACCTCGG CGCAGAGCAG
GCTCGCAGTA TTGTGTGGAC CAAAGGGACA ACGGAAGCCG TCAATCTGGT GGCGCAATGT
TATGCCCGCC CCCGATTGCA GCCAGGTGAT GAAATTCTGG TTAGCGAAGC CGAACACCAT
GCCAACCTGA TTCCATGGTT AATGGTGGCG CAGCAAACAG GGGCTCGCGT GGTAAAGCTG
CCGATTGGCG CAGACTATTT GCCGGATCTT CGCTTGCTGC CCTCACTACT CAATGCCCGC
ACCCGTCTGC TGGCTATCGG GCAAATGTCG AACGTGACGG GCGGTATGCC GGACCTGCAA
CACGCCATTA CTCTGGCGCA TCAGGCCGGC GCCGTAGTGA TGGTCGATGG TGCGCAAGGC
ATTGTGCATA CCACGACGGA TGTGTCGGCG TTGAGTGCGG ATTTTTATGC TTTTTCCGGC
CACAAACTGT ATGGCCCGAC CGGCATCGGC GCGCTATACG GCAAACCCGA CTTGCTGGAA
ACCATGCCGC CCTGGCAGGG CGGTGGAAAA ATGATGACGA CGGTATCGTT TGACGGTTTT
ACGCCTCAGG CAATCCCCCA GCGATTTGAA GCCGGCACGC CGCATATTGC CGGGGTGATC
GGGCTAGCCG CCGCGATTGA CTGGTGGCGA CAACAGGACA ACCGCGCCGC CGATCGGCAC
AGTGTTGCAC TGGCGAACGA TGCAGAACAG CAATTGAGCC GCATACCCGG TTTTCGCAGC
TTTCGCGCGC CGGGCTCCAG CCTGTTGTCA TTCACTATTG ATGGCGTGCA CCACCACGAT
CTGGTGACGT TGCTGGCGGA GGATGGCATC GCCTTACGGG CCGGTCACCA TTGTGCTCAA
CCACTGATGG CCGCTCTGGG TGTTGCGGGT ACATTACGAG CCTCGTTTGC GCCTTACAAC
CAGCAACAGG ATGTGGACCA ACTGGTCCAC TCAACCCAGA AAGCCCTTGA ATTACTGATG
GATTGA
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| Protein sequence | MKPFNAPDFR RQFPALRQPG VYLDSAATAL KPEAVIAAVQ HCYASETGNV HRSQHRAARQ
LSEAFELARE KVAKYLGAEQ ARSIVWTKGT TEAVNLVAQC YARPRLQPGD EILVSEAEHH
ANLIPWLMVA QQTGARVVKL PIGADYLPDL RLLPSLLNAR TRLLAIGQMS NVTGGMPDLQ
HAITLAHQAG AVVMVDGAQG IVHTTTDVSA LSADFYAFSG HKLYGPTGIG ALYGKPDLLE
TMPPWQGGGK MMTTVSFDGF TPQAIPQRFE AGTPHIAGVI GLAAAIDWWR QQDNRAADRH
SVALANDAEQ QLSRIPGFRS FRAPGSSLLS FTIDGVHHHD LVTLLAEDGI ALRAGHHCAQ
PLMAALGVAG TLRASFAPYN QQQDVDQLVH STQKALELLM D
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