Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_3135 |
Symbol | |
ID | 8121000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 3575301 |
End bp | 3576149 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644853512 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003005436 |
Protein GI | 251790715 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCTGA CCGCTCCCCC CAATCTGCCC ACGACGTATT CGCCCGAACC GGTGCCTCGC CATAGCCCGA CCGGTTCGCT GCTTACCCAT CAAATTATTG CCCGTAACCA ATACGTATTA CGCACGGTAG TGATGCACGC CGATCTGATT GGGCTGGTCG TTTCCGGCAC CAAGCAGTTG CTGGCACCGC AAGGCCGCAG TGATTTTGCA TCCGGCGAGT TATTCATATT GCCGCGCGGC ACCCAATGGG ATGTTGTCAA CGACCCGGCG CCGCAAGGGC GTTATGTCGC GCAAGTTATC AACCTGCAAC CCGAGACGAT AACGCGCTTT TATCAGTCTT TCGGTCAGTT CGCCGCGCTG GAACCGGTGC GCAGCGCAGC CCGGGTCGCA GAGACCCCGG CAAGCATAAA AACGGCGTTT TTGCGTGCCG CCGATGCATT GAGCGACGCA AACTGTTCGA CAACGCTCAG CGAACACCGG GTGTTGGAAG TGTTGCTCTT GCTGGCTGAA CACGCCGGCG TGGTCCTGGC GCCGCCGGGA GCATTGAACT GGAGCGAACG GGTGCGGCGT CTGGTGGCGC AGCGCCCGTA TGATCACTGG TCGGCAAGCC GTGTAGCGCA AGCGCTGTCC ACAACCGCCA GCACCCTGAA CCGCCGACTG GCACAGGAAG GCTGCACCAT CACGACCTGT GTGCGGGATA CCCGGCTGGA AACGGCAATG GTGTTGTTAC AGTCATCCGA ACGCCCGGTC GCCGCTATCG CCCTTGACGT CGGTTATGAA TCCCACAGCA AATTCACCGC CGCTTTCCGT CGCCGATTCG GCGTTGTGCC ATCGGCATTG CGTGGGTAG
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Protein sequence | MTLTAPPNLP TTYSPEPVPR HSPTGSLLTH QIIARNQYVL RTVVMHADLI GLVVSGTKQL LAPQGRSDFA SGELFILPRG TQWDVVNDPA PQGRYVAQVI NLQPETITRF YQSFGQFAAL EPVRSAARVA ETPASIKTAF LRAADALSDA NCSTTLSEHR VLEVLLLLAE HAGVVLAPPG ALNWSERVRR LVAQRPYDHW SASRVAQALS TTASTLNRRL AQEGCTITTC VRDTRLETAM VLLQSSERPV AAIALDVGYE SHSKFTAAFR RRFGVVPSAL RG
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