| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3030 |
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| Symbol | |
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| ID | 8117007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 3451999 |
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| End bp | 3453402 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644853407 |
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| Product | glycoside hydrolase family 28 |
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| Protein accession | YP_003005331 |
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| Protein GI | 251790610 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5434] Endopolygalacturonase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACATT GTTTTACTTA TGGGGTAATT ATGCATAAAG GAATAGCGTT CTCGCTGTTG
GCGTCCTGCG CACTGGCTGG CATGAGCGCA CAATCGGCTG AAAAAGTGGC GTTTCCCGAT
CGCGTTTGCG ACGTAACCCG TTATGGTGCA GAGGGGCATC GCCTGCAAAT TGCACTGAAT
ACCTCTTCCT TTCAAAAGGC GATTGATGAA TGTGCGGCTG CCGGTGGCGG TACTGTGCTG
GTGCCGGCGG GAAACTATCT GGTAGAACCG TTATTTCTGA AAAGCAACGT CCGCCTGCAT
CTGGAAAAAC ATGCCACGCT GGTAGCCTCG ACCGGAGAAA GCGCTTACCG TGCAACTGAC
AGTACTCGCT ATGCGCAAGC GGAAAACGGC TGGCTGCCGT TTATCAGCAT CGCTGATGCG
CAGAACGTTG CGATTACCGG CGAAGGCACC ATTGATGGAC AAGGTGCGGT ATGGTGGGAG
CGCTGGCGCG AGGCTATCCG CGCTACCGGC AAGAAAGGGG GAACAGACCG CCCGCGGCTA
ATTTATATTA CTCGTTCCAG CCAGGTACTG GTTGACGGCG TCACCTTGAC TAACTCTCCC
AGCTTCCATG TGGTGATGCG CTATGCCCGT GATGTGACGG TAAACGGTAC GAGTATTATT
GCCCCATGGC ATGCGCCAAA CACCGATGCT ATCGATCCTA TCGACAGCCA GAACATCCGG
ATTACCAACA ACGTGATTGA TTGCAATGAT GACCATATTG CCATTAAAGC GGAAAAACCG
GACAGCCGTT TCCCGGATGG CGTGGTAGAT AATGTCTATA TTGCCAACAA TGTATTAAAA
CAGGGGCGTG GTATTTCTAT CGGCAGTGAG ACGTCCGGCG GCGTCAATAA TGTACTGGTG
GAAAACAACC GCTTTGAAGG TTCCATGTAT GGTATTCGCA TTAAATCGTT GCGCGGCAAG
GGCGGTGAGG TGAAGAACGT GACCTATCGC CATACCCGGA TGGTGAATGT GGAAGTACCG
CTGGTGTTCT CCGGCTACTA CCAGGCCGCG CCGATTGTAC AAGCCGAAGT CGACAAATTA
CTGCAGGCGG GCGGCTTTAC GCTGGGCGAG CAGATTTACC CGCCGGATAC CGAGCCGGCT
CAGCCGTTCG ACAAGGTGAA AACACCGCAT TTCAGTAACA TCACTATCGT CGATTTGGAG
TCAACGGGGC GCAGCAAAGC GGCCGGGTAC ATTATTGGCG TACCGGAAGC GCCGTTGAGC
GGTTTCCATT TTGAGCAGGT ACGGATCGAG GCGGAAAAAG GGCTACGGGT ACGCAATGCC
GAGCTGGTAA CCCAGGGACT GACCCTCAAT GCGAAACAAG GGGAGGCGCT GTTGCTGGAT
AAAGGAGCGA ACGTCACCCG CTAA
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| Protein sequence | MKHCFTYGVI MHKGIAFSLL ASCALAGMSA QSAEKVAFPD RVCDVTRYGA EGHRLQIALN
TSSFQKAIDE CAAAGGGTVL VPAGNYLVEP LFLKSNVRLH LEKHATLVAS TGESAYRATD
STRYAQAENG WLPFISIADA QNVAITGEGT IDGQGAVWWE RWREAIRATG KKGGTDRPRL
IYITRSSQVL VDGVTLTNSP SFHVVMRYAR DVTVNGTSII APWHAPNTDA IDPIDSQNIR
ITNNVIDCND DHIAIKAEKP DSRFPDGVVD NVYIANNVLK QGRGISIGSE TSGGVNNVLV
ENNRFEGSMY GIRIKSLRGK GGEVKNVTYR HTRMVNVEVP LVFSGYYQAA PIVQAEVDKL
LQAGGFTLGE QIYPPDTEPA QPFDKVKTPH FSNITIVDLE STGRSKAAGY IIGVPEAPLS
GFHFEQVRIE AEKGLRVRNA ELVTQGLTLN AKQGEALLLD KGANVTR
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