| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2042 |
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| Symbol | |
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| ID | 8119519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 2345256 |
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| End bp | 2346680 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644852429 |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_003004367 |
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| Protein GI | 251789646 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.160512 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATGA GTTTTACTCC CGACTTCGGC TATCGCCTGG CCGCGAAACG CCTGTTGCTG
GTCGCCTGTT GTCTGCTGTC GGCAACGACG CTGCCTGTCG CTGCGGTGAC GCAGATAGAA
GCCACCAGCG AAATCCGCCT GAATATCAAT CAGGGACGTA TGCTGCAACT GGACCACATC
CCGGATAGCG TACTGATCGC CGACCCGGCG ATCGCCAGTT TTGAATTGCC GTCGCCGGGC
AATGTGTTTG TGTTTGCCAA AGGCGTGGGG AACACCACGC TGTATGCAAT GGATGTTGAC
GGGCAGGTGG TCAGCGCCAT TCACCTGGTG GTCGAGCATG ATCTGGATGC GCTGAAAGAG
CGCCTGCGTC GTGAATTCCC CGATGCGCAA ATCCAACTGG AAGCCTCGGT GCCAAACGGT
GTGATTGTCC GCGGCAGCGT GGAAACGCCG CAGGACGCGA AAAAAGTGAT CGACAGCGTG
CAGGCGTGGG TTGGCGCGTC CGCTTCGTCA CGCGGCAGCG CAGGTGGGGG CGGCGGGGGC
GGGAGCGCTA TGCCGGCGTC CAGCAGCACC TCGCCGAACG TGGTGAACCA ACTGAAAGTG
CGCACGCCAT CGCAGATCAA CATTCGTGTG CGGGTGGTGG AAGTGTCGCG CAAGCTCACC
CATGAGCTGG GCTTTAACTG GGATTCATCG CTGAACCGGG GACGCAATAC CATTGGTTTT
GGTTCGGGGG CGCTGAGCAA TTTCTTTAGC GCCACCAGCA ACACCTTCAG CCGTGAGGCG
GGCAGCGCCT CGCTGGGTTA CAACTACACC GGCAGTGATG GTTCGCTGGG TACGCTGCTG
TCCGCGCTGA ATTCACAGGG GATGGCTTCG GTGCTGGCGG AGCCGAATCT GACGGCGATG
TCCGGTGAAA CGGCCGCCTT TGCTGCCGGC GGCGAAGTGC CGATTGTGTT GATTACCGGT
AACAGCGTCA GCATCGATTA CAAATCTTAC GGCGTGATCC TGCGTATGAC GCCAACTCTG
CTGTCGGCGA ACCGCATCAG TTTACATATC GCGCCGGAAG TGAGTGAGCT GACGTCGGTC
GGCTCGGTAC AACTGGAAGG CGGCTCCACC ATTCCGGCGT TGACTGTACG CCGCGCCGAT
ACCACGGTGG AACTGGCCAG CGGTCAGAGT TTCGCCCTGG CGGGCATGTT GCGCAGCAGC
AACAGCCAGA CGGTGGCCGG CGTACCGGGA CTGTCGGGTA TTCCTTTGCT GGGCCGCGCA
TTTGAGAGGG AATCCACCAG TTCGGAAGAG ACTGAGCTGG TGATTATCGC TACCGCCTAT
GTGGTCGCGC CGGTGAGCGC CGGCACGCTG CAAACCCCTG GTCAGGGCGC GAAAATGCTC
GATGCCAACA CGCCTCGGTT CGGCGCGGCA GGCTACCTCT ACTAA
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| Protein sequence | MKMSFTPDFG YRLAAKRLLL VACCLLSATT LPVAAVTQIE ATSEIRLNIN QGRMLQLDHI
PDSVLIADPA IASFELPSPG NVFVFAKGVG NTTLYAMDVD GQVVSAIHLV VEHDLDALKE
RLRREFPDAQ IQLEASVPNG VIVRGSVETP QDAKKVIDSV QAWVGASASS RGSAGGGGGG
GSAMPASSST SPNVVNQLKV RTPSQINIRV RVVEVSRKLT HELGFNWDSS LNRGRNTIGF
GSGALSNFFS ATSNTFSREA GSASLGYNYT GSDGSLGTLL SALNSQGMAS VLAEPNLTAM
SGETAAFAAG GEVPIVLITG NSVSIDYKSY GVILRMTPTL LSANRISLHI APEVSELTSV
GSVQLEGGST IPALTVRRAD TTVELASGQS FALAGMLRSS NSQTVAGVPG LSGIPLLGRA
FERESTSSEE TELVIIATAY VVAPVSAGTL QTPGQGAKML DANTPRFGAA GYLY
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